RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 SPNS3Q6ZMD2 512 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 GPRIN3Q6ZVF9 776 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 IQCKQ8N0W5 287 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 BBS5Q8N3I7 341 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 MINDY2Q8NBR6 621 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 CSNK1G2-AS1Q8NCQ2 148 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 DTX3LQ8TDB6 740 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 SELENOMQ8WWX9 145 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 OR1E3Q8WZA6 343 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 SHC3Q92529 594 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 TADA1Q96BN2 335 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 ST6GALNAC5Q9BVH7 336 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 ULBP3Q9BZM4 244 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 TSPY26PQ9H489 355 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 ALG9Q9H6U8 611 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 ACTR8Q9H981 624 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 ESM1Q9NQ30 184 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 YAE1D1Q9NRH1 226 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 AGPAT4Q9NRZ5 378 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 CENPMQ9NSP4 180 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 ATP6V1HQ9UI12 483 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 RPL26L1Q9UNX3 145 aaKnown RBP2.97□□□□□ -1.93
HERC1-215ENST00000561436 PPIL1Q9Y3C6 166 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 LOC400499M0QZD8 3231 aa2.97□□□□□ -1.93
HERC1-215ENST00000561436 MN1Q10571 1320 aaPredicted RBP2.96□□□□□ -1.93
HERC1-215ENST00000561436 A0A087WZY1 265 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 IGHV3-16A0A0C4DH30 117 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 MFSD2BA6NFX1 497 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 TCP11X1B4DZS4 312 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 F8WDY8 70 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 GALR3O60755 368 aaPredicted RBP2.96□□□□□ -1.94
HERC1-215ENST00000561436 CRLF1O75462 422 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 HPP00738 406 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 JCHAINP01591 159 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 PCCBP05166 539 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 KLK3P07288 261 aaPredicted RBP2.96□□□□□ -1.94
HERC1-215ENST00000561436 PLEKP08567 350 aaPredicted RBP2.96□□□□□ -1.94
HERC1-215ENST00000561436 HCKP08631 526 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 HOXD4P09016 255 aaPredicted RBP2.96□□□□□ -1.94
HERC1-215ENST00000561436 HBQ1P09105 142 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 ANXA4P09525 319 aaPredicted RBP2.96□□□□□ -1.94
HERC1-215ENST00000561436 CALCBP10092 127 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 THRBP10828 461 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 UQCRBP14927 111 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 CYP11B1P15538 503 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 XRCC1P18887 633 aaPredicted RBP2.96□□□□□ -1.94
HERC1-215ENST00000561436 DPP4P27487 766 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 CASP1P29466 404 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 SDC4P31431 198 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 DLSTP36957 453 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 ACTR1BP42025 376 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 HCAR3P49019 387 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 GSK3BP49841 420 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 SULT1E1P49888 294 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 EMDP50402 254 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 NDUFA8P51970 172 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 ARHGDIAP52565 204 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 RAG2P55895 527 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 ACTR1AP61163 376 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 SRSF6Q13247 344 aaKnown RBP2.96□□□□□ -1.94
HERC1-215ENST00000561436 CYTH1Q15438 398 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 CD226Q15762 336 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 PCK2Q16822 640 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 ZSWIM7Q19AV6 140 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 PYCR3Q53H96 274 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 WDR25Q64LD2 544 aaPredicted RBP2.96□□□□□ -1.94
HERC1-215ENST00000561436 PDPK2PQ6A1A2 396 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 DMKNQ6E0U4 476 aaPredicted RBP2.96□□□□□ -1.94
HERC1-215ENST00000561436 ISLR2Q6UXK2 745 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 FAM183BPQ6ZVS7 135 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 NET1Q7Z628 596 aaPredicted RBP2.96□□□□□ -1.94
HERC1-215ENST00000561436 GTSCR1Q86UQ5 136 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 FAM71AQ8IYT1 594 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 TEX9Q8N6V9 391 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 ZNRF1Q8ND25 227 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 ST6GALNAC3Q8NDV1 305 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 C17orf47Q8NEP4 570 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 OR52B4Q8NGK2 314 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 OR4Q3Q8NH05 313 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 DLX4Q92988 240 aaPredicted RBP2.96□□□□□ -1.94
HERC1-215ENST00000561436 NUS1Q96E22 293 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 PDXPQ96GD0 296 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 ELMO2Q96JJ3 720 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 C9orf72Q96LT7 481 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 PSKH2Q96QS6 385 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 OR2M4Q96R27 311 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 MCCC1Q96RQ3 725 aaPredicted RBP2.96□□□□□ -1.94
HERC1-215ENST00000561436 TM6SF2Q9BZW4 377 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 ING2Q9H160 280 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 LRRC19Q9H756 370 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 KAT8Q9H7Z6 458 aaKnown RBP2.96□□□□□ -1.94
HERC1-215ENST00000561436 COG4Q9H9E3 785 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 PDFQ9HBH1 243 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 RDH14Q9HBH5 336 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 LHX9Q9NQ69 397 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 DCAF13Q9NV06 445 aaKnown RBP2.96□□□□□ -1.94
HERC1-215ENST00000561436 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.96□□□□□ -1.94
HERC1-215ENST00000561436 GPR83Q9NYM4 423 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 ATXN10Q9UBB4 475 aa2.96□□□□□ -1.94
HERC1-215ENST00000561436 P2RX2Q9UBL9 471 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms