RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 ACER2Q5QJU3 275 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 SLC35F1Q5T1Q4 408 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 SYT6Q5T7P8 510 aaPredicted RBP6.78□□□□□ -1.32
TPM1-231ENST00000561395 ZNF468Q5VIY5 522 aaPredicted RBP6.78□□□□□ -1.32
TPM1-231ENST00000561395 PRAMEF20Q5VT98 475 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 C1orf140Q5VVS0 124 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 NXNL2Q5VZ03 156 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 SLC22A10Q63ZE4 541 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 B3GNTL1Q67FW5 361 aaPredicted RBP6.78□□□□□ -1.32
TPM1-231ENST00000561395 NIPAL3Q6P499 406 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 CXXC5Q7LFL8 322 aaKnown RBP6.78□□□□□ -1.32
TPM1-231ENST00000561395 NANOGNBQ7Z5D8 188 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 PLCZ1Q86YW0 608 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 CPOQ8IVL8 374 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 GID4Q8IVV7 300 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 GPALPP1Q8IXQ4 340 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 TMEM156Q8N614 296 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 SIRT6Q8N6T7 355 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 C10orf53Q8N6V4 93 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 WDSUB1Q8N9V3 476 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 BBS1Q8NFJ9 593 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 OR4K17Q8NGC6 315 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 OR6S1Q8NH40 331 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 MOSPD2Q8NHP6 518 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 POC1BQ8TC44 478 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 PSMF1Q92530 271 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 RORBQ92753 470 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 RFKQ969G6 155 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 LGALS12Q96DT0 336 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 C1GALT1C1Q96EU7 318 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 THOC3Q96J01 351 aaKnown RBP6.78□□□□□ -1.32
TPM1-231ENST00000561395 MRGPRX4Q96LA9 322 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 SGCZQ96LD1 299 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 C5orf34Q96MH7 638 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 NPAS1Q99742 590 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 CDCA4Q9BXL8 241 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 ANGPTL4Q9BY76 406 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 NDEL1Q9GZM8 345 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 PROK2Q9HC23 129 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 HINT3Q9NQE9 182 aaKnown RBP6.78□□□□□ -1.32
TPM1-231ENST00000561395 MRPS18AQ9NVS2 196 aaKnown RBP6.78□□□□□ -1.32
TPM1-231ENST00000561395 RSL24D1Q9UHA3 163 aaKnown RBP6.78□□□□□ -1.32
TPM1-231ENST00000561395 KLHL21Q9UJP4 597 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 FBXL2Q9UKC9 423 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.78□□□□□ -1.32
TPM1-231ENST00000561395 VDAC3Q9Y277 283 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 SLC6A5Q9Y345 797 aa6.78□□□□□ -1.32
TPM1-231ENST00000561395 POLEQ07864 2286 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 A0A087WZY1 265 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 IRGMA1A4Y4 181 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 CCDC160A6NGH7 325 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 FAM183AA6NL82 134 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 FAM47E-STBD1D6RA91 191 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 PRR23D1E9PI22 279 aaPredicted RBP6.77□□□□□ -1.33
TPM1-231ENST00000561395 BLOC1S5-TXNDC5H3BN57 136 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 ZNF701M0R085 212 aaPredicted RBP6.77□□□□□ -1.33
TPM1-231ENST00000561395 M0R3G1 203 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 ZNF208O43345 1280 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 IDH3BO43837 385 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 AHSA1O95433 338 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 RAB36O95755 333 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 IFNGP01579 166 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 HIST1H2ABP04908 130 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 LCKP06239 509 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 PRR23D2P0DMB1 279 aaPredicted RBP6.77□□□□□ -1.33
TPM1-231ENST00000561395 ADORA3P0DMS8 318 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 HIST1H1CP16403 213 aaKnown RBP6.77□□□□□ -1.33
TPM1-231ENST00000561395 PSMB9P28065 219 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 NOS3P29474 1203 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 RPL4P36578 427 aaKnown RBP6.77□□□□□ -1.33
TPM1-231ENST00000561395 AQP2P41181 271 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 RPS5P46782 204 aaKnown RBP6.77□□□□□ -1.33
TPM1-231ENST00000561395 MTNR1AP48039 350 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 MAP2K6P52564 334 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 RPL18Q07020 188 aaKnown RBP6.77□□□□□ -1.33
TPM1-231ENST00000561395 RAB40BQ12829 278 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 AIMP2Q13155 320 aaKnown RBP6.77□□□□□ -1.33
TPM1-231ENST00000561395 CRMP1Q14194 572 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 INPP5JQ15735 1006 aaPredicted RBP6.77□□□□□ -1.33
TPM1-231ENST00000561395 KLHL22Q53GT1 634 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 ALG10Q5BKT4 473 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 DCAF10Q5QP82 559 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 ZNF362Q5T0B9 420 aaPredicted RBP6.77□□□□□ -1.33
TPM1-231ENST00000561395 ARMC4Q5T2S8 1044 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 FAM69AQ5T7M9 428 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 GPR107Q5VW38 600 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 RNLSQ5VYX0 342 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 PLBD1Q6P4A8 553 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 HIST3H2AQ7L7L0 130 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 ZNF367Q7RTV3 350 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 MDGA2Q7Z553 956 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 IGFN1Q86VF2 1251 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 CLVS1Q8IUQ0 354 aaPredicted RBP6.77□□□□□ -1.33
TPM1-231ENST00000561395 BEST3Q8N1M1 668 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 LRRC75AQ8NAA5 344 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 SLC37A3Q8NCC5 494 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 OR52I1Q8NGK6 324 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 ZNF420Q8TAQ5 688 aaPredicted RBP6.77□□□□□ -1.33
TPM1-231ENST00000561395 THAP4Q8WY91 577 aa6.77□□□□□ -1.33
TPM1-231ENST00000561395 HIST1H2ACQ93077 130 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms