RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 B4DXG7 233 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 K7EQG2 157 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 PDHXO00330 501 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 FCN1O00602 326 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 HSD17B6O14756 317 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 AIM2O14862 343 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 RAB29O14966 203 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 RRP8O43159 456 aaKnown RBP2.82□□□□□ -1.96
SPG11-218ENST00000559754 SH3BGRLO75368 114 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 C1orf105O95561 183 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 IGHV3-9P01782 118 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 CD55P08174 381 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 UBCP0CG48 685 aaKnown RBP2.82□□□□□ -1.96
SPG11-218ENST00000559754 PVRP15151 417 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 IL12AP29459 219 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 FOXN2P32314 431 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 DDOSTP39656 456 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 NSG1P42857 185 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 GPR4P46093 362 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 ATP4BP51164 291 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 KPNA2P52292 529 aaKnown RBP2.82□□□□□ -1.96
SPG11-218ENST00000559754 EFNA3P52797 238 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 IST1P53990 364 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 SRPXP78539 464 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 MRPS22P82650 360 aaKnown RBP2.82□□□□□ -1.96
SPG11-218ENST00000559754 CDH17Q12864 832 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 TRDNQ13061 729 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 XRCC4Q13426 336 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 IL18R1Q13478 541 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 RCAN2Q14206 197 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 USF2Q15853 346 aaPredicted RBP2.82□□□□□ -1.96
SPG11-218ENST00000559754 LY6G6FQ5SQ64 297 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 CCDC122Q5T0U0 273 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 SLC22A10Q63ZE4 541 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 OR52W1Q6IF63 320 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 CCDC137Q6PK04 289 aaKnown RBP2.82□□□□□ -1.96
SPG11-218ENST00000559754 Q6ZSR3 168 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 FRA10AC1Q70Z53 315 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 TMUB2Q71RG4 321 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 MRPL21Q7Z2W9 205 aaKnown RBP2.82□□□□□ -1.96
SPG11-218ENST00000559754 ERO1BQ86YB8 467 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 C4orf32Q8N8J7 132 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 ZNF491Q8N8L2 437 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 CSNK1G2-AS1Q8NCQ2 148 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 OR51L1Q8NGJ5 315 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 ZNF596Q8TC21 504 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 CD300LFQ8TDQ1 290 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 CRYGNQ8WXF5 182 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.82□□□□□ -1.96
SPG11-218ENST00000559754 UFD1Q92890 307 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 NAT6Q93015 286 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 RAB3CQ96E17 227 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 CELF6Q96J87 481 aaKnown RBP2.82□□□□□ -1.96
SPG11-218ENST00000559754 XPO6Q96QU8 1125 aaKnown RBP2.82□□□□□ -1.96
SPG11-218ENST00000559754 ATP5SQ99766 215 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 MFFQ9GZY8 342 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 SPACA1Q9HBV2 294 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 ADAP2Q9NPF8 381 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 PNO1Q9NRX1 252 aaKnown RBP2.82□□□□□ -1.96
SPG11-218ENST00000559754 WARS2Q9UGM6 360 aaKnown RBP2.82□□□□□ -1.96
SPG11-218ENST00000559754 SPATA2Q9UM82 520 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 PLEKHH1Q9ULM0 1364 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 FER1L5A0AVI2 2057 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 PRRC2AP48634 2157 aaKnown RBP2.81□□□□□ -1.96
SPG11-218ENST00000559754 TRGV8A0A0C4DH27 118 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 A0A1W2PRD5 423 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 TMEM120BA0PK00 339 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 OR5B21A6NL26 309 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 M0R3G1 203 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 SULT2B1O00204 365 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 PHF1O43189 567 aaPredicted RBP2.81□□□□□ -1.96
SPG11-218ENST00000559754 HCN1O60741 890 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 OR7A10O76100 309 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 OXSR1O95747 527 aaPredicted RBP2.81□□□□□ -1.96
SPG11-218ENST00000559754 TSPAN13O95857 204 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 ANXA5P08758 320 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 UMPSP11172 480 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 ABOP16442 354 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 BCKDHBP21953 392 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 CCNOP22674 350 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 LMO2P25791 158 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 CD82P27701 267 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 DCKP27707 260 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 SPRP35270 261 aaPredicted RBP2.81□□□□□ -1.96
SPG11-218ENST00000559754 LEPP41159 167 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 SLC1A1P43005 524 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 TMED10P49755 219 aaKnown RBP2.81□□□□□ -1.96
SPG11-218ENST00000559754 ARHGDIAP52565 204 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 RIDAP52758 137 aaKnown RBP2.81□□□□□ -1.96
SPG11-218ENST00000559754 PKNOX1P55347 436 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 NDUFV3P56181 108 aaKnown RBP2.81□□□□□ -1.96
SPG11-218ENST00000559754 RIPK4P57078 832 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 RPS14P62263 151 aaKnown RBP2.81□□□□□ -1.96
SPG11-218ENST00000559754 PUDPQ08623 228 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 SELENBP1Q13228 472 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 OR5I1Q13606 314 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 KCNJ11Q14654 390 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 OXA1LQ15070 435 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 CARD16Q5EG05 197 aa2.81□□□□□ -1.96
SPG11-218ENST00000559754 RNLSQ5VYX0 342 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms