RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 NPIPA1Q9UND3 350 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 SLC6A5Q9Y345 797 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 ZNF407Q9C0G0 2248 aa14.87□□□□□ -0.03
TPM1-219ENST00000559397 MED12Q93074 2177 aa14.86□□□□□ -0.03
TPM1-219ENST00000559397 TMED7-TICAM2A0A0A6YYA0 188 aa14.86□□□□□ -0.03
TPM1-219ENST00000559397 TRGV5A0A0B4J1U4 118 aa14.86□□□□□ -0.03
TPM1-219ENST00000559397 SLC2A10O95528 541 aa14.86□□□□□ -0.03
TPM1-219ENST00000559397 TSPAN19P0C672 248 aa14.86□□□□□ -0.03
TPM1-219ENST00000559397 ASAH2BP0C7U1 165 aa14.86□□□□□ -0.03
TPM1-219ENST00000559397 PEPDP12955 493 aa14.86□□□□□ -0.03
TPM1-219ENST00000559397 DCKP27707 260 aa14.86□□□□□ -0.03
TPM1-219ENST00000559397 NFATC3Q12968 1075 aa14.86□□□□□ -0.03
TPM1-219ENST00000559397 ANKDD1AQ495B1 522 aa14.86□□□□□ -0.03
TPM1-219ENST00000559397 RNLSQ5VYX0 342 aa14.86□□□□□ -0.03
TPM1-219ENST00000559397 CLVS1Q8IUQ0 354 aaPredicted RBP14.86□□□□□ -0.03
TPM1-219ENST00000559397 ZNF420Q8TAQ5 688 aaPredicted RBP14.86□□□□□ -0.03
TPM1-219ENST00000559397 NEIL3Q8TAT5 605 aa14.86□□□□□ -0.03
TPM1-219ENST00000559397 KTI12Q96EK9 354 aaPredicted RBP14.86□□□□□ -0.03
TPM1-219ENST00000559397 SFXN2Q96NB2 322 aa14.86□□□□□ -0.03
TPM1-219ENST00000559397 MOGAT1Q96PD6 335 aa14.86□□□□□ -0.03
TPM1-219ENST00000559397 GPX7Q96SL4 187 aaPredicted RBP14.86□□□□□ -0.03
TPM1-219ENST00000559397 DOK1Q99704 481 aa14.86□□□□□ -0.03
TPM1-219ENST00000559397 HINT3Q9NQE9 182 aaKnown RBP14.86□□□□□ -0.03
TPM1-219ENST00000559397 RSL24D1Q9UHA3 163 aaKnown RBP14.86□□□□□ -0.03
TPM1-219ENST00000559397 HIF3AQ9Y2N7 669 aa14.86□□□□□ -0.03
TPM1-219ENST00000559397 TMED7Q9Y3B3 224 aa14.86□□□□□ -0.03
TPM1-219ENST00000559397 TRAV36DV7A0A075B6V5 113 aa14.85□□□□□ -0.03
TPM1-219ENST00000559397 A0A1B0GVC2 190 aa14.85□□□□□ -0.03
TPM1-219ENST00000559397 SNTNA6NMZ2 147 aa14.85□□□□□ -0.03
TPM1-219ENST00000559397 TDGF1P3P51864 188 aa14.85□□□□□ -0.03
TPM1-219ENST00000559397 NXNL2Q5VZ03 156 aa14.85□□□□□ -0.03
TPM1-219ENST00000559397 POMZP3Q6PJE2 187 aa14.85□□□□□ -0.03
TPM1-219ENST00000559397 DPY19L2P2Q6ZN68 376 aa14.85□□□□□ -0.03
TPM1-219ENST00000559397 STK35Q8TDR2 534 aa14.85□□□□□ -0.03
TPM1-219ENST00000559397 TAAR8Q969N4 342 aa14.85□□□□□ -0.03
TPM1-219ENST00000559397 GPR137Q96N19 417 aa14.85□□□□□ -0.03
TPM1-219ENST00000559397 SPRR3Q9UBC9 169 aa14.85□□□□□ -0.03
TPM1-219ENST00000559397 CHRNA9Q9UGM1 479 aa14.85□□□□□ -0.03
TPM1-219ENST00000559397 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.85□□□□□ -0.03
TPM1-219ENST00000559397 DNAJC13O75165 2243 aa14.85□□□□□ -0.03
TPM1-219ENST00000559397 KALRNO60229 2985 aa14.85□□□□□ -0.03
TPM1-219ENST00000559397 TMEM72A0PK05 275 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 CCDC160A6NGH7 325 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 LINC01387J3KSC0 135 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 SUSD5O60279 629 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 PPP1R3DO95685 299 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 BGLAPP02818 100 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 PRPS1P60891 318 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 SELENBP1Q13228 472 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 ARHGAP11AQ6P4F7 1023 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 LRRC75AQ8NAA5 344 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 RFKQ969G6 155 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 TMEM80Q96HE8 168 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 SLX1AQ9BQ83 275 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 PTDSS2Q9BVG9 487 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 LDAHQ9H6V9 325 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 FKRPQ9H9S5 495 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 FGF20Q9NP95 211 aaPredicted RBP14.84□□□□□ -0.03
TPM1-219ENST00000559397 NANSQ9NR45 359 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 ASF1BQ9NVP2 202 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 ZNF229Q9UJW7 825 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 SPTA1P02549 2419 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 IRGMA1A4Y4 181 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 ZC3H12DA2A288 527 aaKnown RBP14.84□□□□□ -0.03
TPM1-219ENST00000559397 TTLL8A6PVC2 850 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 A8MVM7 634 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 MCIDASD6RGH6 385 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 AQP7O14520 342 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 ARPC3O15145 178 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 LCKP06239 509 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 CCNA2P20248 432 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 HTR1FP30939 366 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 UQCRC1P31930 480 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 RAC1P63000 192 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 KLHL22Q53GT1 634 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 KRTCAP3Q53RY4 240 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 SLC35F1Q5T1Q4 408 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 GPR107Q5VW38 600 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 C5orf46Q6UWT4 87 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 CXXC5Q7LFL8 322 aaKnown RBP14.84□□□□□ -0.03
TPM1-219ENST00000559397 CPOQ8IVL8 374 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 OR52I1Q8NGK6 324 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 OR6S1Q8NH40 331 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 ISOC1Q96CN7 298 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 LGALS12Q96DT0 336 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 TAPBPLQ9BX59 468 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 NRIP3Q9NQ35 241 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 SERINC1Q9NRX5 453 aa14.84□□□□□ -0.03
TPM1-219ENST00000559397 DIMT1Q9UNQ2 313 aaKnown RBP14.84□□□□□ -0.03
TPM1-219ENST00000559397 H3BML4 177 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 ZNF208O43345 1280 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 IDH3BO43837 385 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 ACTL6AO96019 429 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 MT-ATP6P00846 226 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 ADORA3P0DMS8 318 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 APEHP13798 732 aaKnown RBP14.83□□□□□ -0.04
TPM1-219ENST00000559397 SHC1P29353 583 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 MTNR1AP48039 350 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 LHX2P50458 406 aa14.83□□□□□ -0.04
TPM1-219ENST00000559397 MAP2K6P52564 334 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms