RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 KATNB1Q9BVA0 655 aa17.8■□□□□ 0.44
TSPAN3-206ENST00000559373 LINC00470Q9BZP3 86 aa17.8■□□□□ 0.44
TSPAN3-206ENST00000559373 CHODLQ9H9P2 273 aa17.8■□□□□ 0.44
TSPAN3-206ENST00000559373 CRLF2Q9HC73 371 aa17.8■□□□□ 0.44
TSPAN3-206ENST00000559373 SLC52A3Q9NQ40 469 aa17.8■□□□□ 0.44
TSPAN3-206ENST00000559373 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.8■□□□□ 0.44
TSPAN3-206ENST00000559373 FBN3Q75N90 2809 aa17.8■□□□□ 0.44
TSPAN3-206ENST00000559373 ARPC4-TTLL3A0A0A6YYG9 625 aa17.79■□□□□ 0.44
TSPAN3-206ENST00000559373 SH3PXD2BA1X283 911 aa17.79■□□□□ 0.44
TSPAN3-206ENST00000559373 MS4A18H0YCH9 400 aa17.79■□□□□ 0.44
TSPAN3-206ENST00000559373 AIM2O14862 343 aa17.79■□□□□ 0.44
TSPAN3-206ENST00000559373 TPST2O60704 377 aa17.79■□□□□ 0.44
TSPAN3-206ENST00000559373 ERLIN1O75477 346 aa17.79■□□□□ 0.44
TSPAN3-206ENST00000559373 PRKAR1BP31321 381 aa17.79■□□□□ 0.44
TSPAN3-206ENST00000559373 PDLIM4P50479 330 aa17.79■□□□□ 0.44
TSPAN3-206ENST00000559373 AQP5P55064 265 aa17.79■□□□□ 0.44
TSPAN3-206ENST00000559373 LSM11P83369 360 aaKnown RBP eCLIP17.79■□□□□ 0.44
TSPAN3-206ENST00000559373 HGFACQ04756 655 aa17.79■□□□□ 0.44
TSPAN3-206ENST00000559373 SCARB2Q14108 478 aa17.79■□□□□ 0.44
TSPAN3-206ENST00000559373 MS4A18Q3C1V0 323 aa17.79■□□□□ 0.44
TSPAN3-206ENST00000559373 REEP3Q6NUK4 255 aa17.79■□□□□ 0.44
TSPAN3-206ENST00000559373 H1FNTQ75WM6 255 aaPredicted RBP17.79■□□□□ 0.44
TSPAN3-206ENST00000559373 SLC38A4Q969I6 547 aa17.79■□□□□ 0.44
TSPAN3-206ENST00000559373 BOD1Q96IK1 185 aa17.79■□□□□ 0.44
TSPAN3-206ENST00000559373 C7orf26Q96N11 449 aa17.79■□□□□ 0.44
TSPAN3-206ENST00000559373 OR2M2Q96R28 347 aa17.79■□□□□ 0.44
TSPAN3-206ENST00000559373 OBP2BQ9NPH6 170 aa17.79■□□□□ 0.44
TSPAN3-206ENST00000559373 CRNNQ9UBG3 495 aaPredicted RBP17.79■□□□□ 0.44
TSPAN3-206ENST00000559373 STAB1Q9NY15 2570 aa17.78■□□□□ 0.44
TSPAN3-206ENST00000559373 TRAV36DV7A0A075B6V5 113 aa17.78■□□□□ 0.44
TSPAN3-206ENST00000559373 SLC35F4A4IF30 521 aa17.78■□□□□ 0.44
TSPAN3-206ENST00000559373 SERPINI2O75830 405 aa17.78■□□□□ 0.44
TSPAN3-206ENST00000559373 IFNA2P01563 188 aa17.78■□□□□ 0.44
TSPAN3-206ENST00000559373 IGLV1-44P01699 117 aa17.78■□□□□ 0.44
TSPAN3-206ENST00000559373 NQO1P15559 274 aaKnown RBP17.78■□□□□ 0.44
TSPAN3-206ENST00000559373 THBS4P35443 961 aa17.78■□□□□ 0.44
TSPAN3-206ENST00000559373 RGS8P57771 180 aaPredicted RBP17.78■□□□□ 0.44
TSPAN3-206ENST00000559373 OR1Q1Q15612 314 aa17.78■□□□□ 0.44
TSPAN3-206ENST00000559373 FAM69AQ5T7M9 428 aa17.78■□□□□ 0.44
TSPAN3-206ENST00000559373 C6orf89Q6UWU4 347 aa17.78■□□□□ 0.44
TSPAN3-206ENST00000559373 SMYD1Q8NB12 490 aa17.78■□□□□ 0.44
TSPAN3-206ENST00000559373 PROX1Q92786 737 aa17.78■□□□□ 0.44
TSPAN3-206ENST00000559373 TXNDC15Q96J42 360 aa17.78■□□□□ 0.44
TSPAN3-206ENST00000559373 MOGAT1Q96PD6 335 aa17.78■□□□□ 0.44
TSPAN3-206ENST00000559373 BEX2Q9BXY8 128 aa17.78■□□□□ 0.44
TSPAN3-206ENST00000559373 MED29Q9NX70 200 aa17.78■□□□□ 0.44
TSPAN3-206ENST00000559373 KLHL14Q9P2G3 628 aa17.78■□□□□ 0.44
TSPAN3-206ENST00000559373 FKBP7Q9Y680 259 aa17.78■□□□□ 0.44
TSPAN3-206ENST00000559373 IGHV4-61A0A0C4DH41 118 aa17.77■□□□□ 0.44
TSPAN3-206ENST00000559373 OR6C65A6NJZ3 312 aa17.77■□□□□ 0.44
TSPAN3-206ENST00000559373 TRAF3IP2O43734 574 aaPredicted RBP17.77■□□□□ 0.44
TSPAN3-206ENST00000559373 NCALDP61601 193 aa17.77■□□□□ 0.44
TSPAN3-206ENST00000559373 PIGFQ07326 219 aa17.77■□□□□ 0.44
TSPAN3-206ENST00000559373 ADRM1Q16186 407 aa17.77■□□□□ 0.44
TSPAN3-206ENST00000559373 AGBL2Q5U5Z8 902 aa17.77■□□□□ 0.44
TSPAN3-206ENST00000559373 DHRS4L2Q6PKH6 230 aa17.77■□□□□ 0.44
TSPAN3-206ENST00000559373 MDP1Q86V88 176 aa17.77■□□□□ 0.44
TSPAN3-206ENST00000559373 KRT73Q86Y46 540 aa17.77■□□□□ 0.44
TSPAN3-206ENST00000559373 SVOPLQ8N434 492 aa17.77■□□□□ 0.44
TSPAN3-206ENST00000559373 C10orf53Q8N6V4 93 aa17.77■□□□□ 0.44
TSPAN3-206ENST00000559373 LSMEM1Q8N8F7 131 aa17.77■□□□□ 0.44
TSPAN3-206ENST00000559373 MAGEE2Q8TD90 523 aaPredicted RBP17.77■□□□□ 0.44
TSPAN3-206ENST00000559373 PIMREGQ9BSJ6 248 aa17.77■□□□□ 0.44
TSPAN3-206ENST00000559373 PRDM4Q9UKN5 801 aa17.77■□□□□ 0.44
TSPAN3-206ENST00000559373 RCE1Q9Y256 329 aa17.77■□□□□ 0.44
TSPAN3-206ENST00000559373 TRBV5-3A0A0A0MS03 114 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 VWC2LB2RUY7 222 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 RPL36A-HNRNPH2H7BZ11 118 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 hCG_2039718K7EN88 272 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 M0R3H8 397 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 PHF1O43189 567 aaPredicted RBP17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 OR2T1O43869 369 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 TGDSO95455 350 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 IGKV3-15P01624 115 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 HLA-HP01893 362 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 OPN1SWP03999 348 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 CSF3P09919 207 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 CBR1P16152 277 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 SLC6A2P23975 617 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 NR4A2P43354 598 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 CAMK2DQ13557 499 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 SELPLGQ14242 412 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 IQCCQ4KMZ1 466 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 TTMPQ5BVD1 217 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 KRT80Q6KB66 452 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 ULK3Q6PHR2 472 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 SPATA21Q7Z572 469 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 UEVLDQ8IX04 471 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 TMEM123Q8N131 208 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 DNAJA4Q8WW22 397 aaPredicted RBP17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 SLC35B4Q969S0 331 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 SLC47A1Q96FL8 570 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 MS4A3Q96HJ5 214 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 SOX7Q9BT81 388 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 CCDC28BQ9BUN5 200 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 NOX3Q9HBY0 568 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 CDC42EP3Q9UKI2 254 aa17.76■□□□□ 0.43
TSPAN3-206ENST00000559373 IGHV2OR16-5A0A0B4J2B6 119 aa17.75■□□□□ 0.43
TSPAN3-206ENST00000559373 LRP5LA4QPB2 252 aa17.75■□□□□ 0.43
TSPAN3-206ENST00000559373 B9A039 149 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms