RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 TNFRSF1BP20333 461 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 PTAFRP25105 342 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 ZNF83P51522 516 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 POU3F1Q03052 451 aaPredicted RBP9.59□□□□□ -0.87
SPG11-216ENST00000559347 PUDPQ08623 228 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 LRRC23Q53EV4 343 aaPredicted RBP9.59□□□□□ -0.87
SPG11-216ENST00000559347 HIKESHIQ53FT3 197 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 C1QTNF12Q5T7M4 302 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 KLHL17Q6TDP4 642 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 ARPINQ7Z6K5 226 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 CARM1Q86X55 608 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 TREML1Q86YW5 311 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 TMEM123Q8N131 208 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 ZNF454Q8N9F8 522 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 OR2T12Q8NG77 320 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 OR1K1Q8NGR3 316 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 PROX1Q92786 737 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 OR2M2Q96R28 347 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 ASPNQ9BXN1 380 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 NELFAQ9H3P2 528 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 CXorf56Q9H5V9 222 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 MRPL39Q9NYK5 338 aaKnown RBP9.59□□□□□ -0.87
SPG11-216ENST00000559347 BAG5Q9UL15 447 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 LAMP3Q9UQV4 416 aa9.59□□□□□ -0.87
SPG11-216ENST00000559347 MAGED1Q9Y5V3 778 aaPredicted RBP9.59□□□□□ -0.87
SPG11-216ENST00000559347 C2CD3Q4AC94 2353 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 USF3Q68DE3 2245 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 MS4A18H0YCH9 400 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 M0R1B8 84 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 NME4O00746 187 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 ARHGEF9O43307 516 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 CCDC22O60826 627 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 SLC43A1O75387 559 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 HLA-DOBP13765 273 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 CDH2P19022 906 aaPredicted RBP9.58□□□□□ -0.88
SPG11-216ENST00000559347 CD40P25942 277 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 SEC24CP53992 1094 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 SH3BGRP55822 239 aaPredicted RBP9.58□□□□□ -0.88
SPG11-216ENST00000559347 RPS4XP62701 263 aaKnown RBP9.58□□□□□ -0.88
SPG11-216ENST00000559347 IL1RL1Q01638 556 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 ROR2Q01974 943 aaKnown RBP9.58□□□□□ -0.88
SPG11-216ENST00000559347 PMS2P3Q13401 168 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 C1DQ13901 141 aaKnown RBP9.58□□□□□ -0.88
SPG11-216ENST00000559347 PGGHGQ32M88 737 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 MS4A18Q3C1V0 323 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 TBRG1Q3YBR2 411 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 C8orf82Q6P1X6 216 aaPredicted RBP9.58□□□□□ -0.88
SPG11-216ENST00000559347 KLHL24Q6TFL4 600 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 UEVLDQ8IX04 471 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 MICU2Q8IYU8 434 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 SMAP2Q8WU79 429 aaPredicted RBP9.58□□□□□ -0.88
SPG11-216ENST00000559347 MPP4Q96JB8 637 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 PRSS27Q9BQR3 290 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 POLR2J2Q9GZM3 115 aaKnown RBP9.58□□□□□ -0.88
SPG11-216ENST00000559347 POLR2J3Q9H1A7 115 aaKnown RBP9.58□□□□□ -0.88
SPG11-216ENST00000559347 MYLK2Q9H1R3 596 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 ZNF701Q9NV72 531 aaPredicted RBP9.58□□□□□ -0.88
SPG11-216ENST00000559347 CMTM6Q9NX76 183 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 GMPR2Q9P2T1 348 aaKnown RBP9.58□□□□□ -0.88
SPG11-216ENST00000559347 MGAT4BQ9UQ53 548 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 SH3GLB1Q9Y371 365 aa9.58□□□□□ -0.88
SPG11-216ENST00000559347 CR1P17927 2039 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 ARPC4-TTLL3A0A0A6YYG9 625 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 ELOVL7A1L3X0 281 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 RPL36A-HNRNPH2H7BZ11 118 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 OVOL3O00110 214 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 KPNA4O00629 521 aaPredicted RBP9.57□□□□□ -0.88
SPG11-216ENST00000559347 PLPP3O14495 311 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 WNT11O96014 354 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 FOSL1P15407 271 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 LSP1P33241 339 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 SLC7A2P52569 658 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 ZNF74Q16587 644 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 CYBRD1Q53TN4 286 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 HMBOX1Q6NT76 420 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 TTC33Q6PID6 262 aaPredicted RBP9.57□□□□□ -0.88
SPG11-216ENST00000559347 PRSS57Q6UWY2 283 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 NHLRC1Q6VVB1 395 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 HACD2Q6Y1H2 254 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 B3GLCTQ6Y288 498 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 DEF8Q6ZN54 512 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 YTHDF3Q7Z739 585 aaKnown RBP9.57□□□□□ -0.88
SPG11-216ENST00000559347 DTX2Q86UW9 622 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 WDFY1Q8IWB7 410 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 SLC15A3Q8IY34 581 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 GPR137CQ8N3F9 429 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 C10orf53Q8N6V4 93 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 PIK3C3Q8NEB9 887 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 ANKK1Q8NFD2 765 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 OR5J2Q8NH18 312 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 MAGEE2Q8TD90 523 aaPredicted RBP9.57□□□□□ -0.88
SPG11-216ENST00000559347 RADILQ96JH8 1075 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 Q96MF0 132 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 ELAC2Q9BQ52 826 aaKnown RBP9.57□□□□□ -0.88
SPG11-216ENST00000559347 TRAF4Q9BUZ4 470 aaPredicted RBP9.57□□□□□ -0.88
SPG11-216ENST00000559347 C1QTNF6Q9BXI9 259 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 SLC19A3Q9BZV2 496 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 FAM107BQ9H098 131 aa9.57□□□□□ -0.88
SPG11-216ENST00000559347 NSRP1Q9H0G5 558 aaKnown RBP9.57□□□□□ -0.88
SPG11-216ENST00000559347 FKRPQ9H9S5 495 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms