RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 NDUFS1P28331 727 aa6.58□□□□□ -1.36
USP3-210ENST00000559192 SLC6A9P48067 706 aa6.58□□□□□ -1.36
USP3-210ENST00000559192 UBE2KP61086 200 aa6.58□□□□□ -1.36
USP3-210ENST00000559192 GLYR1Q49A26 553 aaPredicted RBP6.58□□□□□ -1.36
USP3-210ENST00000559192 OR5M10Q6IEU7 315 aa6.58□□□□□ -1.36
USP3-210ENST00000559192 C12orf76Q8N812 135 aaPredicted RBP6.58□□□□□ -1.36
USP3-210ENST00000559192 PEX11GQ96HA9 241 aa6.58□□□□□ -1.36
USP3-210ENST00000559192 MYADMQ96S97 322 aa6.58□□□□□ -1.36
USP3-210ENST00000559192 OR8D2Q9GZM6 311 aa6.58□□□□□ -1.36
USP3-210ENST00000559192 IL21RQ9HBE5 538 aa6.58□□□□□ -1.36
USP3-210ENST00000559192 ENY2Q9NPA8 101 aa6.58□□□□□ -1.36
USP3-210ENST00000559192 HRASLS2Q9NWW9 162 aa6.58□□□□□ -1.36
USP3-210ENST00000559192 RNF186Q9NXI6 227 aa6.58□□□□□ -1.36
USP3-210ENST00000559192 GPR34Q9UPC5 381 aa6.58□□□□□ -1.36
USP3-210ENST00000559192 A0A0B4J2A0 478 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 TMEM72A0PK05 275 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 PEX12O00623 359 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 PTHLHP12272 177 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 ITGB7P26010 798 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 BIDP55957 195 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 SEC61A1P61619 476 aaKnown RBP6.57□□□□□ -1.36
USP3-210ENST00000559192 SLC7A9P82251 487 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 MRPS10P82664 201 aaKnown RBP6.57□□□□□ -1.36
USP3-210ENST00000559192 TNK1Q13470 666 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 CHRFAM7AQ494W8 412 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 ZNF585AQ6P3V2 769 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 CSNK1A1LQ8N752 337 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 LINC01599Q8WXQ3 324 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 ARRDC3Q96B67 414 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 RASD2Q96D21 266 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 C1QTNF6Q9BXI9 259 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 NKX6-2Q9C056 277 aaPredicted RBP6.57□□□□□ -1.36
USP3-210ENST00000559192 SLC6A20Q9NP91 592 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 ISYNA1Q9NPH2 558 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 ZNF701Q9NV72 531 aaPredicted RBP6.57□□□□□ -1.36
USP3-210ENST00000559192 SHPKQ9UHJ6 478 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 CBLCQ9ULV8 474 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 A0A1W2PQU0 124 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 A8MXE2 369 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 FCMRO60667 390 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 CPN1P15169 458 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 CXCL3P19876 107 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 MAKP20794 623 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 BSGP35613 385 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 RIDAP52758 137 aaKnown RBP6.57□□□□□ -1.36
USP3-210ENST00000559192 MVDP53602 400 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 MRPL58Q14197 206 aaKnown RBP6.57□□□□□ -1.36
USP3-210ENST00000559192 FAM199XQ6PEV8 388 aaPredicted RBP6.57□□□□□ -1.36
USP3-210ENST00000559192 CLEC9AQ6UXN8 241 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 CAMKMTQ7Z624 323 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 TMEM200AQ86VY9 491 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 BPHLQ86WA6 291 aaPredicted RBP6.57□□□□□ -1.36
USP3-210ENST00000559192 SLC35F3Q8IY50 421 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 LSMEM1Q8N8F7 131 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 OR11H7Q8NGC8 314 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 OR4D11Q8NGI4 311 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 OR51S1Q8NGJ8 323 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 GOT1L1Q8NHS2 421 aaPredicted RBP6.57□□□□□ -1.36
USP3-210ENST00000559192 GPR148Q8TDV2 347 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 PRTFDC1Q9NRG1 225 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 SMCO4Q9NRQ5 59 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 COPS7AQ9UBW8 275 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 REV1Q9UBZ9 1251 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 PUS1Q9Y606 427 aaKnown RBP eCLIP6.57□□□□□ -1.36
USP3-210ENST00000559192 FAM230AA0A1W2PPH8 454 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 A0A1W2PS29 197 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 TMEM82A0PJX8 343 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 KDM4EB2RXH2 506 aaPredicted RBP6.57□□□□□ -1.36
USP3-210ENST00000559192 PTBP3O95758 552 aaKnown RBP6.57□□□□□ -1.36
USP3-210ENST00000559192 EGFP01133 1207 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 SERPINA7P05543 415 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 RAB40ALP0C0E4 278 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 H2BFMP0C1H6 154 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 CPMP14384 443 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 SELENOPP49908 381 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 TLE1Q04724 770 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 SPOCK1Q08629 439 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 AARDQ4LEZ3 155 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 PDZD11Q5EBL8 140 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 TECPR1Q7Z6L1 1165 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 CDRT4Q8N9R6 151 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 ZNF417Q8TAU3 575 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 RAB40AQ8WXH6 277 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 LINC00052Q96N35 136 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 DERL3Q96Q80 235 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 ZNF768Q9H5H4 540 aaKnown RBP6.57□□□□□ -1.36
USP3-210ENST00000559192 ZMAT3Q9HA38 289 aaKnown RBP6.57□□□□□ -1.36
USP3-210ENST00000559192 KLK11Q9UBX7 282 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 ADAM29Q9UKF5 820 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 SLC35A3Q9Y2D2 325 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 GPR55Q9Y2T6 319 aaPredicted RBP6.57□□□□□ -1.36
USP3-210ENST00000559192 C20orf202A1L168 122 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 YKT6O15498 198 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 RNGTTO60942 597 aaKnown RBP6.57□□□□□ -1.36
USP3-210ENST00000559192 FKTNO75072 461 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 GIPP09681 153 aaPredicted RBP6.57□□□□□ -1.36
USP3-210ENST00000559192 GP1BBP13224 206 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 ACHEP22303 614 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 ITGB8P26012 769 aa6.57□□□□□ -1.36
USP3-210ENST00000559192 CSNK1G2P78368 415 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms