RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 TPD52L1Q16890 204 aaPredicted RBP1.94□□□□□ -2.1
VPS13C-207ENST00000558919 Q6ZR03 302 aa1.94□□□□□ -2.1
VPS13C-207ENST00000558919 CCDC65Q8IXS2 484 aa1.94□□□□□ -2.1
VPS13C-207ENST00000558919 ARRDC1Q8N5I2 433 aa1.94□□□□□ -2.1
VPS13C-207ENST00000558919 ZNF709Q8N972 641 aa1.94□□□□□ -2.1
VPS13C-207ENST00000558919 OR4D5Q8NGN0 318 aa1.94□□□□□ -2.1
VPS13C-207ENST00000558919 OR2G3Q8NGZ4 309 aa1.94□□□□□ -2.1
VPS13C-207ENST00000558919 CD300LFQ8TDQ1 290 aa1.94□□□□□ -2.1
VPS13C-207ENST00000558919 TPPP3Q9BW30 176 aa1.94□□□□□ -2.1
VPS13C-207ENST00000558919 ACTR6Q9GZN1 396 aa1.94□□□□□ -2.1
VPS13C-207ENST00000558919 RIBC2Q9H4K1 309 aa1.94□□□□□ -2.1
VPS13C-207ENST00000558919 INPP5EQ9NRR6 644 aa1.94□□□□□ -2.1
VPS13C-207ENST00000558919 FARSBQ9NSD9 589 aaKnown RBP1.94□□□□□ -2.1
VPS13C-207ENST00000558919 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.94□□□□□ -2.1
VPS13C-207ENST00000558919 SH3BGRL2Q9UJC5 107 aa1.94□□□□□ -2.1
VPS13C-207ENST00000558919 IGLV2-18A0A075B6J9 118 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 PLAC8L1A1L4L8 177 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 CCDC182A6NF36 153 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 OPN1MWP04001 364 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 RHOXF2BP0C7M4 288 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 OPN1MW2P0DN77 364 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 OPN1MW3P0DN78 364 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 HSPA5P11021 654 aaKnown RBP1.93□□□□□ -2.1
VPS13C-207ENST00000558919 KRT13P13646 458 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 PCMT1P22061 227 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 IL12AP29459 219 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 GYG1P46976 350 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 KLHL30Q0D2K2 578 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 ELP6Q0PNE2 266 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 OXA1LQ15070 435 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 SLC15A2Q16348 729 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 SGCAQ16586 387 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 GUCA2BQ16661 112 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 CARD16Q5EG05 197 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 COA6Q5JTJ3 125 aaKnown RBP1.93□□□□□ -2.1
VPS13C-207ENST00000558919 C1orf220Q5T0J3 134 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 KPRPQ5T749 579 aaPredicted RBP1.93□□□□□ -2.1
VPS13C-207ENST00000558919 NANOGP8Q6NSW7 305 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 H2AFVQ71UI9 128 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 PGAP1Q75T13 922 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 ZNF546Q86UE3 836 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 FAM86B1Q8N7N1 296 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 FGF14Q92915 247 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 DTNBP1Q96EV8 351 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 BMFQ96LC9 184 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 NDFIP1Q9BT67 221 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 CAPS2Q9BXY5 557 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 ING2Q9H160 280 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 ZNF430Q9H8G1 570 aaPredicted RBP1.93□□□□□ -2.1
VPS13C-207ENST00000558919 ZDHHC4Q9NPG8 344 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 THUMPD1Q9NXG2 353 aaKnown RBP1.93□□□□□ -2.1
VPS13C-207ENST00000558919 LAMP5Q9UJQ1 280 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 BLOC1S6Q9UL45 172 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 CABIN1Q9Y6J0 2220 aa1.93□□□□□ -2.1
VPS13C-207ENST00000558919 BRWD3Q6RI45 1802 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 PRSS37A4D1T9 235 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 H3BNH8 94 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 XKRYO14609 159 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 TBX19O60806 448 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 B4GALT2O60909 372 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 RBBP9O75884 186 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 C6orf47O95873 294 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 ZDHHC11BP0C7U3 371 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 EPB41P11171 864 aaKnown RBP1.92□□□□□ -2.1
VPS13C-207ENST00000558919 MUC1P15941 1255 aaPredicted RBP1.92□□□□□ -2.1
VPS13C-207ENST00000558919 SOX6P35712 828 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 CHI3L1P36222 383 aaPredicted RBP1.92□□□□□ -2.1
VPS13C-207ENST00000558919 PPT1P50897 306 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 GANABQ14697 944 aaKnown RBP1.92□□□□□ -2.1
VPS13C-207ENST00000558919 SLC36A3Q495N2 470 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 LCN12Q6JVE5 192 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 SLC25A24Q6NUK1 477 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 HMGN2P46Q86SG4 172 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 VN1R2Q8NFZ6 395 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 ACTRT1Q8TDG2 376 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 MAIP1Q8WWC4 291 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 CTNNBL1Q8WYA6 563 aaPredicted RBP1.92□□□□□ -2.1
VPS13C-207ENST00000558919 THRSPQ92748 146 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 LINC00477Q96M19 166 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 TGM7Q96PF1 710 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 RNF2Q99496 336 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 ZNF2Q9BSG1 426 aaPredicted RBP1.92□□□□□ -2.1
VPS13C-207ENST00000558919 GBA3Q9H227 469 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 NHEJ1Q9H9Q4 299 aaPredicted RBP1.92□□□□□ -2.1
VPS13C-207ENST00000558919 CTPS2Q9NRF8 586 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 HOXC10Q9NYD6 342 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 TMOD2Q9NZR1 351 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 XCL2Q9UBD3 114 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 TMCO1Q9UM00 188 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 PNPLA6Q8IY17 1366 aa1.92□□□□□ -2.1
VPS13C-207ENST00000558919 COLCA2A8K830 154 aa1.91□□□□□ -2.1
VPS13C-207ENST00000558919 RGS16O15492 202 aaPredicted RBP1.91□□□□□ -2.1
VPS13C-207ENST00000558919 ENTPD5O75356 428 aa1.91□□□□□ -2.1
VPS13C-207ENST00000558919 IGHV3-43DP0DP04 118 aa1.91□□□□□ -2.1
VPS13C-207ENST00000558919 ZNF30P17039 623 aa1.91□□□□□ -2.1
VPS13C-207ENST00000558919 DRD5P21918 477 aa1.91□□□□□ -2.1
VPS13C-207ENST00000558919 FGF8P55075 233 aaPredicted RBP1.91□□□□□ -2.1
VPS13C-207ENST00000558919 SPIBQ01892 262 aa1.91□□□□□ -2.1
VPS13C-207ENST00000558919 REG3AQ06141 175 aa1.91□□□□□ -2.1
VPS13C-207ENST00000558919 FZD2Q14332 565 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms