RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 SPRY3O43610 288 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 HCRTO43612 131 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 RDH16O75452 317 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 EIF3GO75821 320 aaKnown RBP eCLIP2.93□□□□□ -1.94
HERC1-203ENST00000558532 BEST1O76090 585 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 AP2A2O94973 939 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 UBL3O95164 117 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 IFNGP01579 166 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 HIST1H2ABP04908 130 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 RB1P06400 928 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 SRPRAP08240 638 aaKnown RBP2.93□□□□□ -1.94
HERC1-203ENST00000558532 HOXC4P09017 264 aaPredicted RBP2.93□□□□□ -1.94
HERC1-203ENST00000558532 UBBP0CG47 229 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 UBCP0CG48 685 aaKnown RBP2.93□□□□□ -1.94
HERC1-203ENST00000558532 ACP2P11117 423 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 SELLP14151 372 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 PAX1P15863 534 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 GNLYP22749 145 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 NFYAP23511 347 aaPredicted RBP2.93□□□□□ -1.94
HERC1-203ENST00000558532 LMO2P25791 158 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 ELAVL4P26378 380 aaKnown RBP2.93□□□□□ -1.94
HERC1-203ENST00000558532 CHI3L1P36222 383 aaPredicted RBP2.93□□□□□ -1.94
HERC1-203ENST00000558532 THPOP40225 353 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 ETV5P41161 510 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 MNDAP41218 407 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 CD86P42081 329 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 RPL35P42766 123 aaKnown RBP2.93□□□□□ -1.94
HERC1-203ENST00000558532 SLC6A12P48065 614 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 PITPNBP48739 271 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 TTPAP49638 278 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 TAF6P49848 677 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 CDH12P55289 794 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 CTBP2P56545 445 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 VSX2P58304 361 aaPredicted RBP2.93□□□□□ -1.94
HERC1-203ENST00000558532 STARD6P59095 220 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 SEC61A1P61619 476 aaKnown RBP2.93□□□□□ -1.94
HERC1-203ENST00000558532 AP1S1P61966 158 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 TSPAN5P62079 268 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 RPS27AP62979 156 aaKnown RBP2.93□□□□□ -1.94
HERC1-203ENST00000558532 UBA52P62987 128 aaKnown RBP2.93□□□□□ -1.94
HERC1-203ENST00000558532 ZXDBP98169 803 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 MAT1AQ00266 395 aaKnown RBP2.93□□□□□ -1.94
HERC1-203ENST00000558532 SPIBQ01892 262 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 MXD1Q05195 221 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 STX4Q12846 297 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 ECH1Q13011 328 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 SNTB1Q13884 538 aaKnown RBP2.93□□□□□ -1.94
HERC1-203ENST00000558532 SERTAD2Q14140 314 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 GK2Q14410 553 aaPredicted RBP2.93□□□□□ -1.94
HERC1-203ENST00000558532 KRT33BQ14525 404 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 HNF4GQ14541 408 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 ZNF345Q14585 488 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 IL13RA2Q14627 380 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 HEPACAMQ14CZ8 416 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 RGNQ15493 299 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 MPPED2Q15777 294 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 TAF12Q16514 161 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 RPE65Q16518 533 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 EIF2S3LQ2VIR3 472 aaKnown RBP2.93□□□□□ -1.94
HERC1-203ENST00000558532 CDNFQ49AH0 187 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 SYT14P1Q58G82 188 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 TMEM255AQ5JRV8 349 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 ARMC12Q5T9G4 340 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 HES5Q5TA89 166 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 ZNF57Q68EA5 555 aaPredicted RBP2.93□□□□□ -1.94
HERC1-203ENST00000558532 ZNF660Q6AZW8 331 aaPredicted RBP2.93□□□□□ -1.94
HERC1-203ENST00000558532 OR7E24Q6IFN5 339 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 SLC25A25Q6KCM7 469 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 KIAA1161Q6NSJ0 714 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 PAQR6Q6TCH4 344 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 CASP12Q6UXS9 341 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 LINGO4Q6UY18 593 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 GLDNQ6ZMI3 551 aaPredicted RBP2.93□□□□□ -1.94
HERC1-203ENST00000558532 DNM1P46Q6ZS02 220 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 RASSF6Q6ZTQ3 369 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 SMIM5Q71RC9 77 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 HIST3H2AQ7L7L0 130 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 LRRC70Q7Z2Q7 622 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 TSPAN33Q86UF1 283 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 TPRA1Q86W33 373 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 NR2C2APQ86WQ0 139 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 TMEM17Q86X19 198 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 PDZD9Q8IXQ8 264 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 KLHDC8AQ8IYD2 350 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 GPC2Q8N158 579 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 SVBPQ8N300 66 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 RYBPQ8N488 228 aaPredicted RBP2.93□□□□□ -1.94
HERC1-203ENST00000558532 LINC00471Q8N535 108 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 C12orf45Q8N5I9 185 aaPredicted RBP2.93□□□□□ -1.94
HERC1-203ENST00000558532 L3MBTL4Q8NA19 623 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 TEX19Q8NA77 164 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 AQP11Q8NBQ7 271 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 AGBL3Q8NEM8 1001 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 DBF4BQ8NFT6 615 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 OR4F15Q8NGB8 312 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 OR11G2Q8NGC1 345 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 OR6C4Q8NGE1 309 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 OR9Q2Q8NGE9 314 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 OR13C4Q8NGS5 318 aa2.93□□□□□ -1.94
HERC1-203ENST00000558532 MOSPD2Q8NHP6 518 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms