RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 THOC1Q96FV9 657 aaKnown RBP13.51□□□□□ -0.25
TPM1-211ENST00000558314 FOXN4Q96NZ1 517 aa13.51□□□□□ -0.25
TPM1-211ENST00000558314 EMC6Q9BV81 110 aa13.51□□□□□ -0.25
TPM1-211ENST00000558314 LINC00470Q9BZP3 86 aa13.51□□□□□ -0.25
TPM1-211ENST00000558314 TMEM27Q9HBJ8 222 aa13.51□□□□□ -0.25
TPM1-211ENST00000558314 CRLF2Q9HC73 371 aa13.51□□□□□ -0.25
TPM1-211ENST00000558314 CDC42EP3Q9UKI2 254 aa13.51□□□□□ -0.25
TPM1-211ENST00000558314 COL6A5A8TX70 2615 aa13.51□□□□□ -0.25
TPM1-211ENST00000558314 ARPC4-TTLL3A0A0A6YYG9 625 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 LOC100289279A0A1B0GTE1 492 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 EVPLLA8MZ36 301 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 B9A039 149 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 hCG_2039718K7EN88 272 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 APEHP13798 732 aaKnown RBP13.5□□□□□ -0.25
TPM1-211ENST00000558314 ETS2P15036 469 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 SLC6A2P23975 617 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 SH3BGRP55822 239 aaPredicted RBP13.5□□□□□ -0.25
TPM1-211ENST00000558314 ADIPOQQ15848 244 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 BEND6Q5SZJ8 279 aaPredicted RBP13.5□□□□□ -0.25
TPM1-211ENST00000558314 BLOC1S3Q6QNY0 202 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 SPATA21Q7Z572 469 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 MDP1Q86V88 176 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 MYPOPQ86VE0 399 aaPredicted RBP13.5□□□□□ -0.25
TPM1-211ENST00000558314 FUNDC1Q8IVP5 155 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 SVOPLQ8N434 492 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 PIK3C3Q8NEB9 887 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 DNAJA4Q8WW22 397 aaPredicted RBP13.5□□□□□ -0.25
TPM1-211ENST00000558314 SLC47A1Q96FL8 570 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 C7orf26Q96N11 449 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 OR2M2Q96R28 347 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 ZNF607Q96SK3 696 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 ASPNQ9BXN1 380 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 NELFAQ9H3P2 528 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 DYNLRB1Q9NP97 96 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 VAPAQ9P0L0 249 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 B3GAT1Q9P2W7 334 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 PRDM4Q9UKN5 801 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 RCE1Q9Y256 329 aa13.5□□□□□ -0.25
TPM1-211ENST00000558314 ANK3Q12955 4377 aaKnown RBP13.5□□□□□ -0.25
TPM1-211ENST00000558314 IGKV1D-42A0A075B6H8 117 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 VSTM5A8MXK1 200 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 LRRN3E7EW58 273 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 PHF1O43189 567 aaPredicted RBP13.49□□□□□ -0.25
TPM1-211ENST00000558314 LMX1BO60663 402 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 OPN1SWP03999 348 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 FAM157CP0CG43 387 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 CD79AP11912 226 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 BMP2P12643 396 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 HLA-DOBP13765 273 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 PPIBP23284 216 aaKnown RBP13.49□□□□□ -0.25
TPM1-211ENST00000558314 AHCYP23526 432 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 THBS4P35443 961 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 NR4A2P43354 598 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 POU3F1Q03052 451 aaPredicted RBP13.49□□□□□ -0.25
TPM1-211ENST00000558314 PIGFQ07326 219 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 PMS2P3Q13401 168 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 OR1Q1Q15612 314 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 C1QTNF12Q5T7M4 302 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 KRT80Q6KB66 452 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 ULK3Q6PHR2 472 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 DHRS4L2Q6PKH6 230 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 ARMC8Q8IUR7 673 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 ZCCHC24Q8N2G6 241 aaKnown RBP13.49□□□□□ -0.25
TPM1-211ENST00000558314 SMYD1Q8NB12 490 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 OR4F15Q8NGB8 312 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 OR6N1Q8NGY5 312 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 RSPO3Q9BXY4 272 aaPredicted RBP13.49□□□□□ -0.25
TPM1-211ENST00000558314 RAB1BQ9H0U4 201 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 MED29Q9NX70 200 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 KLHL14Q9P2G3 628 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 KCNS2Q9ULS6 477 aa13.49□□□□□ -0.25
TPM1-211ENST00000558314 IGHV4-61A0A0C4DH41 118 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 ZNF503-AS2A6NEH8 195 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 PRORSD1PA6NEY8 169 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 C11orf98E9PRG8 122 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 ZNF432O94892 652 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 HPRP00739 348 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 HLA-HP01893 362 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 CBR1P16152 277 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 HOXB9P17482 250 aaPredicted RBP13.48□□□□□ -0.25
TPM1-211ENST00000558314 NPR2P20594 1047 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 GZMKP49863 264 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 SRSF2Q01130 221 aaKnown RBP13.48□□□□□ -0.25
TPM1-211ENST00000558314 HGFACQ04756 655 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 SNTB2Q13425 540 aaKnown RBP13.48□□□□□ -0.25
TPM1-211ENST00000558314 PHYHD1Q5SRE7 291 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 LRIF1Q5T3J3 769 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 AGBL2Q5U5Z8 902 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 FAM166AQ6J272 317 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 C5orf46Q6UWT4 87 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 RANBP3LQ86VV4 465 aaPredicted RBP13.48□□□□□ -0.25
TPM1-211ENST00000558314 PHC2Q8IXK0 858 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 MAGEE2Q8TD90 523 aaPredicted RBP13.48□□□□□ -0.25
TPM1-211ENST00000558314 TMEM158Q8WZ71 300 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 SLC35B4Q969S0 331 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 TXNDC15Q96J42 360 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 EPYCQ99645 322 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 CCDC28BQ9BUN5 200 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 PLK3Q9H4B4 646 aa13.48□□□□□ -0.25
TPM1-211ENST00000558314 IKZF5Q9H5V7 419 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms