RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 NPIPA3F8WFD2 350 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 PRRG2O14669 202 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 CXCL13O43927 109 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 MITFO75030 526 aaPredicted RBP11.11□□□□□ -0.63
TPM1-209ENST00000558072 AKR7A3O95154 331 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 SOX14O95416 240 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 TXNDC12O95881 172 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 IGHMP01871 453 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 EDN3P14138 238 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 ZNF3P17036 446 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 SDHAP31040 664 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 AQP2P41181 271 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 STARP49675 285 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 CASP6P55212 293 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 CLDN20P56880 219 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 CTXN1P60606 82 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 LSM11P83369 360 aaKnown RBP eCLIP11.11□□□□□ -0.634e-12■□□□□ 10.6
TPM1-209ENST00000558072 HSF1Q00613 529 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 MYBPC1Q00872 1141 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 PGGHGQ32M88 737 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 MEDAGQ5VYS4 303 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 OR2A2Q6IF42 318 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 P4HA3Q7Z4N8 544 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 ADCK1Q86TW2 530 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 CISD2Q8N5K1 135 aaKnown RBP11.11□□□□□ -0.63
TPM1-209ENST00000558072 LRRC17Q8N6Y2 441 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 DNAJA3Q96EY1 480 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 UCN2Q96RP3 112 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 MBOAT4Q96T53 435 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 POLDIP3Q9BY77 421 aaKnown RBP11.11□□□□□ -0.63
TPM1-209ENST00000558072 TXNIPQ9H3M7 391 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 FN3KQ9H479 309 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 CALHM2Q9HA72 323 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 PARPBPQ9NWS1 579 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 TAS2R5Q9NYW4 299 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 TNFRSF10DQ9UBN6 386 aa11.11□□□□□ -0.63
TPM1-209ENST00000558072 A0A1B0GTH9 108 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 ZNF726A6NNF4 738 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 DLGAP1O14490 977 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 CYTIPO60759 359 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 BCL10O95999 233 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 ABOP16442 354 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 CENPAP49450 140 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 SLC16A1P53985 500 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 RPL27P61353 136 aaKnown RBP11.1□□□□□ -0.63
TPM1-209ENST00000558072 SRYQ05066 204 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 SNAPC1Q16533 368 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 C12orf73Q69YU5 71 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 PTCHD4Q6ZW05 846 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 FCRLAQ7L513 359 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 THAP5Q7Z6K1 395 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 JAZF1Q86VZ6 243 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 KIF18BQ86Y91 864 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 TMEM99Q8N816 258 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 RFKQ969G6 155 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 INTS12Q96CB8 462 aaKnown RBP11.1□□□□□ -0.63
TPM1-209ENST00000558072 ZFP3Q96NJ6 502 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 ERMAPQ96PL5 475 aaPredicted RBP11.1□□□□□ -0.63
TPM1-209ENST00000558072 TM9SF2Q99805 663 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 SLX1AQ9BQ83 275 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 YTHDF1Q9BYJ9 559 aaKnown RBP11.1□□□□□ -0.63
TPM1-209ENST00000558072 EGLN3Q9H6Z9 239 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 CMC2Q9NRP2 79 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 CLN6Q9NWW5 311 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 H2AFY2Q9P0M6 372 aaPredicted RBP11.1□□□□□ -0.63
TPM1-209ENST00000558072 LRCH1Q9Y2L9 728 aa11.1□□□□□ -0.63
TPM1-209ENST00000558072 FREM3P0C091 2139 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 MPDZO75970 2070 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 SH3D21A4FU49 640 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 SLC22A20A6NK97 555 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 ZNF724A8MTY0 619 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 LRRN3E7EW58 273 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 E9PQ18 207 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 MS4A18H0YCH9 400 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 BHLHE40O14503 412 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 RENP00797 406 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 OPN1LWP04000 364 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 TP53P04637 393 aaPredicted RBP11.09□□□□□ -0.63
TPM1-209ENST00000558072 MYF6P23409 242 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 SHC1P29353 583 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 PCYT1AP49585 367 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 BLVRAP53004 296 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 SUCLG1P53597 346 aaKnown RBP11.09□□□□□ -0.63
TPM1-209ENST00000558072 SNRPGP62308 76 aaKnown RBP11.09□□□□□ -0.63
TPM1-209ENST00000558072 IL5RAQ01344 420 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 LGALS3BPQ08380 585 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 RASGEF1BQ0VAM2 473 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 ITGADQ13349 1161 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 TMED1Q13445 227 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 TOP3AQ13472 1001 aaPredicted RBP11.09□□□□□ -0.63
TPM1-209ENST00000558072 C3AR1Q16581 482 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 MS4A18Q3C1V0 323 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 CLEC12AQ5QGZ9 265 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 SLC25A30Q5SVS4 291 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 C6orf52Q5T4I8 152 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 ZNF691Q5VV52 312 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 DNM1P34Q6PK57 102 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 GFRALQ6UXV0 394 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 USP51Q70EK9 711 aa11.09□□□□□ -0.63
TPM1-209ENST00000558072 SLC35D2Q76EJ3 337 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms