RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 PIGFQ07326 219 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 KRR1Q13601 381 aaKnown RBP12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 JAZF1Q86VZ6 243 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 TMEM99Q8N816 258 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 SDR9C7Q8NEX9 313 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 BBS1Q8NFJ9 593 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 RFKQ969G6 155 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 MYDGFQ969H8 173 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 OTULINQ96BN8 352 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 SIGLEC11Q96RL6 698 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 COPS4Q9BT78 406 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 TXNIPQ9H3M7 391 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 ACKR4Q9NPB9 350 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 GRHPRQ9UBQ7 328 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 ZNF346Q9UL40 294 aaKnown RBP12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 SNX5Q9Y5X3 404 aa12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 TNRC6AQ8NDV7 1962 aaKnown RBP12.98□□□□□ -0.33
ARHGEF40-208ENST00000557498 NPIPB13A6NJU9 1138 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 AQP7P3A6NL99 342 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 NPIPB4C9JG80 1138 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 TNFSF11O14788 317 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 DNPH1O43598 174 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 SERPINI2O75830 405 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 PLGP00747 810 aaPredicted RBP12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 CDK1P06493 297 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 HTR1FP30939 366 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 STARP49675 285 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 CLDN20P56880 219 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 RPL27P61353 136 aaKnown RBP12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 PMP22Q01453 160 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 ZNF169Q14929 603 aaPredicted RBP12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 ACKR1Q16570 336 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 TBR1Q16650 682 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 MESTQ5EB52 335 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 LEG1Q6P5S2 330 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 PAQR6Q6TCH4 344 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 ESPNLQ6ZVH7 1005 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 TRILQ7L0X0 811 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 PRSS48Q7RTY5 328 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 PXKQ7Z7A4 578 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 ARIH2OSQ8N7S6 290 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 CYB561A3Q8NBI2 242 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 NPEPL1Q8NDH3 523 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 OR2V1Q8NHB1 315 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 ZNF519Q8TB69 540 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 ZHX1-C8orf76Q96EF9 292 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 ADGRG7Q96K78 797 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 NMNAT3Q96T66 252 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 DDOQ99489 341 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 NAA11Q9BSU3 229 aaPredicted RBP12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 HCAR1Q9BXC0 346 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 CCDC90BQ9GZT6 254 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 ZDHHC11Q9H8X9 412 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 MED20Q9H944 212 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 H2AFY2Q9P0M6 372 aaPredicted RBP12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 B3GAT1Q9P2W7 334 aa12.97□□□□□ -0.33
ARHGEF40-208ENST00000557498 KIAA1549Q9HCM3 1950 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 IRGMA1A4Y4 181 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 CCDC182A6NF36 153 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 ZNF814B7Z6K7 855 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 NPIPA5E9PKD4 350 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 EIF1AYO14602 144 aaKnown RBP12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 SEC14L5O43304 696 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 EIF1BO60739 113 aaKnown RBP12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 MT-ND2P03891 347 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 PDGFAP04085 211 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 TFAP2AP05549 437 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 FREM3P0C091 2139 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 HLA-DOBP13765 273 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 SLC2A5P22732 501 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 ACVR1BP36896 505 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 LHX2P50458 406 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 DAP3P51398 398 aaKnown RBP12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 SLC25A1P53007 311 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 HSF1Q00613 529 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 TMED1Q13445 227 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 SLC10A1Q14973 349 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 RNFT1Q5M7Z0 435 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 ARMC4Q5T2S8 1044 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 FAM205BPQ63HN1 556 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 HBMQ6B0K9 141 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 Q6ZS92 163 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 ASB18Q6ZVZ8 466 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 MEPCEQ7L2J0 689 aaKnown RBP12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 ADCK1Q86TW2 530 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 UBQLNLQ8IYU4 475 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 SPARTQ8N0X7 666 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 KDM8Q8N371 416 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 STX19Q8N4C7 294 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 ZPLD1Q8TCW7 415 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 PTP4A1Q93096 173 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 RNFT2Q96EX2 444 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 SNX18Q96RF0 628 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 MFRPQ9BY79 579 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 SRXN1Q9BYN0 137 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 NMNAT2Q9BZQ4 307 aa12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 MRPS18AQ9NVS2 196 aaKnown RBP12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 WARS2Q9UGM6 360 aaKnown RBP12.96□□□□□ -0.33
ARHGEF40-208ENST00000557498 NPIPA1Q9UND3 350 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms