RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 TMEM99Q8N816 258 aa6.45□□□□□ -1.38
SCFD1-222ENST00000556768 C1orf162Q8NEQ5 155 aaPredicted RBP6.45□□□□□ -1.38
SCFD1-222ENST00000556768 RNF141Q8WVD5 230 aa6.45□□□□□ -1.38
SCFD1-222ENST00000556768 RASSF5Q8WWW0 418 aa6.45□□□□□ -1.38
SCFD1-222ENST00000556768 TMEM45BQ96B21 275 aa6.45□□□□□ -1.38
SCFD1-222ENST00000556768 C3orf49Q96BT1 292 aa6.45□□□□□ -1.38
SCFD1-222ENST00000556768 SLC47A1Q96FL8 570 aa6.45□□□□□ -1.38
SCFD1-222ENST00000556768 THOC1Q96FV9 657 aaKnown RBP6.45□□□□□ -1.38
SCFD1-222ENST00000556768 HS6ST2Q96MM7 605 aa6.45□□□□□ -1.38
SCFD1-222ENST00000556768 KCNS3Q9BQ31 491 aa6.45□□□□□ -1.38
SCFD1-222ENST00000556768 SLCO5A1Q9H2Y9 848 aa6.45□□□□□ -1.38
SCFD1-222ENST00000556768 ZNF701Q9NV72 531 aaPredicted RBP6.45□□□□□ -1.38
SCFD1-222ENST00000556768 SLC25A37Q9NYZ2 338 aa6.45□□□□□ -1.38
SCFD1-222ENST00000556768 AMDHD2Q9Y303 409 aa6.45□□□□□ -1.38
SCFD1-222ENST00000556768 GMEB1Q9Y692 573 aa6.45□□□□□ -1.38
SCFD1-222ENST00000556768 ROS1P08922 2347 aa6.45□□□□□ -1.38
SCFD1-222ENST00000556768 DPRXA6NFQ7 191 aa6.44□□□□□ -1.38
SCFD1-222ENST00000556768 M0R1B8 84 aa6.44□□□□□ -1.38
SCFD1-222ENST00000556768 FRS3O43559 492 aa6.44□□□□□ -1.38
SCFD1-222ENST00000556768 AKAP8O43823 692 aaKnown RBP6.44□□□□□ -1.38
SCFD1-222ENST00000556768 EDF1O60869 148 aaKnown RBP6.44□□□□□ -1.38
SCFD1-222ENST00000556768 NQO1P15559 274 aaKnown RBP6.44□□□□□ -1.38
SCFD1-222ENST00000556768 PAX1P15863 534 aa6.44□□□□□ -1.38
SCFD1-222ENST00000556768 H2AFXP16104 143 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-222ENST00000556768 AQP1P29972 269 aa6.44□□□□□ -1.38
SCFD1-222ENST00000556768 ZNF83P51522 516 aa6.44□□□□□ -1.38
SCFD1-222ENST00000556768 CDH11P55287 796 aa6.44□□□□□ -1.38
SCFD1-222ENST00000556768 UBE2NP61088 152 aaKnown RBP6.44□□□□□ -1.38
SCFD1-222ENST00000556768 HOXC5Q00444 222 aa6.44□□□□□ -1.38
SCFD1-222ENST00000556768 NFYCQ13952 458 aa6.44□□□□□ -1.38
SCFD1-222ENST00000556768 GABRA6Q16445 453 aa6.44□□□□□ -1.38
SCFD1-222ENST00000556768 TSPO2Q5TGU0 170 aa6.44□□□□□ -1.38
SCFD1-222ENST00000556768 C9orf135Q5VTT2 229 aa6.44□□□□□ -1.38
SCFD1-222ENST00000556768 HMBOX1Q6NT76 420 aa6.44□□□□□ -1.38
SCFD1-222ENST00000556768 DHRS4L2Q6PKH6 230 aa6.44□□□□□ -1.38
SCFD1-222ENST00000556768 CREB3L2Q70SY1 520 aa6.44□□□□□ -1.38
SCFD1-222ENST00000556768 DHDDSQ86SQ9 333 aa6.44□□□□□ -1.38
SCFD1-222ENST00000556768 ATG4DQ86TL0 474 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-222ENST00000556768 C10orf53Q8N6V4 93 aa6.44□□□□□ -1.38
SCFD1-222ENST00000556768 SLC38A4Q969I6 547 aa6.44□□□□□ -1.38
SCFD1-222ENST00000556768 ZNF317Q96PQ6 595 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-222ENST00000556768 BARX1Q9HBU1 254 aaPredicted RBP6.44□□□□□ -1.38
SCFD1-222ENST00000556768 OBP2BQ9NPH6 170 aa6.44□□□□□ -1.38
SCFD1-222ENST00000556768 DLL4Q9NR61 685 aa6.44□□□□□ -1.38
SCFD1-222ENST00000556768 SLC7A10Q9NS82 523 aa6.44□□□□□ -1.38
SCFD1-222ENST00000556768 TESQ9UGI8 421 aaKnown RBP6.44□□□□□ -1.38
SCFD1-222ENST00000556768 B3GALT5Q9Y2C3 310 aa6.44□□□□□ -1.38
SCFD1-222ENST00000556768 TRAV36DV7A0A075B6V5 113 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 AIM2O14862 343 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 RAMP1O60894 148 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 NPPAP01160 153 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 C8BP07358 591 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 PF4V1P10720 104 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 EDNRAP25101 427 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 CD40P25942 277 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 SH3BGRP55822 239 aaPredicted RBP6.43□□□□□ -1.38
SCFD1-222ENST00000556768 CHRNB3Q05901 458 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 MAPRE2Q15555 327 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 RUNDC3AQ59EK9 446 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 NIPAL3Q6P499 406 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 H1FNTQ75WM6 255 aaPredicted RBP6.43□□□□□ -1.38
SCFD1-222ENST00000556768 PATL1Q86TB9 770 aaKnown RBP6.43□□□□□ -1.38
SCFD1-222ENST00000556768 SNX32Q86XE0 403 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 FBXL14Q8N1E6 418 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 GPR137CQ8N3F9 429 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 DPP10Q8N608 796 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 ADAD1Q96M93 576 aaKnown RBP6.43□□□□□ -1.38
SCFD1-222ENST00000556768 ANKRD27Q96NW4 1050 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 OXGR1Q96P68 337 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 ZNF385AQ96PM9 386 aaKnown RBP6.43□□□□□ -1.38
SCFD1-222ENST00000556768 CGREF1Q99674 301 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 ECSITQ9BQ95 431 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 C1QTNF6Q9BXI9 259 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 GFOD1Q9NXC2 390 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 SF3B6Q9Y3B4 125 aaKnown RBP6.43□□□□□ -1.38
SCFD1-222ENST00000556768 SLC25A15Q9Y619 301 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 A0A1B0GWA3 101 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 A0A1W2PR80 420 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 H7C1Q1 480 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 M0QX08 132 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 NPIPB7O75200 414 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 SLC43A1O75387 559 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 OR6A2O95222 327 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 IFNA14P01570 189 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 CRYAAP02489 173 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 SOD3P08294 240 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 ITGA5P08648 1049 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 DANCRP0C864 163 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 FABP6P51161 128 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 ARFIP2P53365 341 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 PPP2R2BQ00005 443 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 VEZF1Q14119 521 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 RAB35Q15286 201 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 OR1Q1Q15612 314 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 NRF1Q16656 503 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 CLEC12BQ2HXU8 276 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 C6orf89Q6UWU4 347 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 DLEU7Q6UYE1 221 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 UEVLDQ8IX04 471 aa6.43□□□□□ -1.38
SCFD1-222ENST00000556768 MSRB3Q8IXL7 192 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms