RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 SIRPAP78324 504 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 ACY1Q03154 408 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 BICRALQ6AI39 1079 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 SFXN4Q6P4A7 337 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 WDR5BQ86VZ2 330 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 OR4M1Q8NGD0 313 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 OR4D9Q8NGE8 314 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 DUSP19Q8WTR2 217 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 THAP4Q8WY91 577 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 RGP1Q92546 391 aaPredicted RBP9.17□□□□□ -0.94
TMEM260-211ENST00000556648 KIAA1143Q96AT1 154 aaPredicted RBP9.17□□□□□ -0.94
TMEM260-211ENST00000556648 OR14A2Q96R54 314 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 WDR77Q9BQA1 342 aaPredicted RBP9.17□□□□□ -0.94
TMEM260-211ENST00000556648 FKRPQ9H9S5 495 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 GALNT9Q9HCQ5 603 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 INIPQ9NRY2 104 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 OCIAD1Q9NX40 245 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 TMED7Q9Y3B3 224 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 VCANP13611 3396 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 TRAV36DV7A0A075B6V5 113 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 A0A0G2JMP0 313 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 TRBV2A0A0J9YWF9 115 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 TRBV11-1A0A0K0K1C0 115 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 A0A0X1KG70 313 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 TMEM200CA6NKL6 621 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 TFECO14948 347 aaPredicted RBP9.17□□□□□ -0.94
TMEM260-211ENST00000556648 ALOX12BO75342 701 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 AKR7A3O95154 331 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 PNLIPP16233 465 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 P2RX1P51575 399 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 OR2B6P58173 313 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 SCN1BQ07699 218 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 CBFBQ13951 182 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 TRAM1Q15629 374 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 COL28A1Q2UY09 1125 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 ZNF684Q5T5D7 378 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 ZNF385CQ66K41 422 aaPredicted RBP9.17□□□□□ -0.94
TMEM260-211ENST00000556648 MZT2AQ6P582 158 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 ADGRG3Q86Y34 549 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 TIGD4Q8IY51 512 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 OR6V1Q8N148 313 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 OR4M2Q8NGB6 313 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 OR5H6Q8NGV6 325 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 PMEPA1Q969W9 287 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 DUSP23Q9BVJ7 150 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 GAREM1Q9H706 876 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 WDR76Q9H967 626 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 C12orf10Q9HB07 376 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 RXFP3Q9NSD7 469 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 EXTL2Q9UBQ6 330 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 GRHPRQ9UBQ7 328 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 ING1Q9UK53 422 aaPredicted RBP9.17□□□□□ -0.94
TMEM260-211ENST00000556648 RARRES3Q9UL19 164 aa9.17□□□□□ -0.94
TMEM260-211ENST00000556648 A0A1B0GTH9 108 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 OR6C70A6NIJ9 312 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 SHISA8B8ZZ34 492 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 TOX3O15405 576 aaPredicted RBP9.16□□□□□ -0.94
TMEM260-211ENST00000556648 ARHGEF9O43307 516 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 RPP14O95059 124 aaKnown RBP9.16□□□□□ -0.94
TMEM260-211ENST00000556648 HIST1H2ABP04908 130 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 TFPIP10646 304 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 APEHP13798 732 aaKnown RBP9.16□□□□□ -0.94
TMEM260-211ENST00000556648 SNRPBP14678 240 aaKnown RBP9.16□□□□□ -0.94
TMEM260-211ENST00000556648 ATF1P18846 271 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 PGCP20142 388 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 POLR2HP52434 150 aaKnown RBP9.16□□□□□ -0.94
TMEM260-211ENST00000556648 CBX3Q13185 183 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 IL10RAQ13651 578 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 CEP78Q5JTW2 689 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 PHF19Q5T6S3 580 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 PAPD4Q6PIY7 484 aaKnown RBP9.16□□□□□ -0.94
TMEM260-211ENST00000556648 LRRC69Q6ZNQ3 347 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 HIST3H2AQ7L7L0 130 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 SLC16A9Q7RTY1 509 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 AKAP14Q86UN6 197 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 PM20D2Q8IYS1 436 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 UBQLNLQ8IYU4 475 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 MAML2Q8IZL2 1156 aaPredicted RBP9.16□□□□□ -0.94
TMEM260-211ENST00000556648 Q8N402 240 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 SAMD12Q8N8I0 201 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 TRMT10AQ8TBZ6 339 aaKnown RBP9.16□□□□□ -0.94
TMEM260-211ENST00000556648 HIST1H2ACQ93077 130 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 GFI1Q99684 422 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 SEMA4CQ9C0C4 833 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 SLC25A18Q9H1K4 315 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 SYT4Q9H2B2 425 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 PRMT8Q9NR22 394 aaPredicted RBP9.16□□□□□ -0.94
TMEM260-211ENST00000556648 TAS2R10Q9NYW0 307 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 MRM2Q9UI43 246 aaKnown RBP9.16□□□□□ -0.94
TMEM260-211ENST00000556648 CLEC4AQ9UMR7 237 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 NPFFR2Q9Y5X5 522 aa9.16□□□□□ -0.94
TMEM260-211ENST00000556648 A0A0B4J293 547 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 ACOD1A6NK06 481 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 PIN1P1O15428 100 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 SEC14L5O43304 696 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 LANCL1O43813 399 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 NPIPB7O75200 414 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 SLC25A12O75746 678 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 KIR2DL3P43628 341 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 NKX2-5P52952 324 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms