RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 RAB35Q15286 201 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 Q1RN00 199 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 SLC25A30Q5SVS4 291 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 RNLSQ5VYX0 342 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ZNF774Q6NX45 483 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ARSKQ6UWY0 536 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 BTNL3Q6UXE8 466 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 WASH2PQ6VEQ5 465 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 HACD2Q6Y1H2 254 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 NCCRP1Q6ZVX7 275 aaPredicted RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 NIPA1Q7RTP0 329 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 HPS6Q86YV9 775 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 MISPQ8IVT2 679 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 PDCL2Q8N4E4 241 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 NFAM1Q8NET5 270 aaPredicted RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 CCDC148Q8NFR7 591 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 CCDC26Q8TAB7 109 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 TYMSOSQ8TAI1 123 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 CCDC110Q8TBZ0 833 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 LMX1AQ8TE12 382 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 TFB1MQ8WVM0 346 aaKnown RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 SELENOMQ8WWX9 145 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 C11orf24Q96F05 449 aaPredicted RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 VSTM2LQ96N03 204 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 GABRG3Q99928 467 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 MED10Q9BTT4 135 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 GPN2Q9H9Y4 310 aaPredicted RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 LPAR2Q9HBW0 351 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 APMAPQ9HDC9 416 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 POLE3Q9NRF9 147 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 SAMSN1Q9NSI8 373 aaKnown RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 FAM49BQ9NUQ9 324 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 DDX19AQ9NUU7 478 aaKnown RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ASF1BQ9NVP2 202 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 HPF1Q9NWY4 346 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 FAM120CQ9NX05 1096 aaKnown RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 APOBEC3BQ9UH17 382 aaKnown RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ATP6V1HQ9UI12 483 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 UBQLN1Q9UMX0 589 aaKnown RBP1.16□□□□□ -2.22
PRPF39-208ENST00000554785 FOXJ3Q9UPW0 622 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 AURKCQ9UQB9 309 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 NTNG1Q9Y2I2 539 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ASB3Q9Y575 518 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 ARID1AO14497 2285 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 LRP4O75096 1905 aa1.16□□□□□ -2.22
PRPF39-208ENST00000554785 DOCK10Q96BY6 2186 aa1.15□□□□□ -2.22
PRPF39-208ENST00000554785 PCM1Q15154 2024 aa1.15□□□□□ -2.22
PRPF39-208ENST00000554785 A0A087WZY1 265 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 A0A0U1RQV5 110 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 ARGFXA6NJG6 315 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 WASHC1A8K0Z3 465 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 D6RAR5 112 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 G3V3Y1 287 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 MKRN2OSH3BPM6 223 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 SLC9A3R1O14745 358 aaPredicted RBP1.15□□□□□ -2.23
PRPF39-208ENST00000554785 CPLX1O14810 134 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 CASKO14936 926 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 TM9SF1O15321 606 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 CACNG3O60359 315 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 NEMFO60524 1076 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 HUS1O60921 280 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 IGFBP1P08833 259 aaPredicted RBP1.15□□□□□ -2.23
PRPF39-208ENST00000554785 ALPIP09923 528 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 GIMD1P0DJR0 217 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 CCDC130P13994 396 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 CD99P14209 185 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 UQCRBP14927 111 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 SDC1P18827 310 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 PAICSP22234 425 aaKnown RBP1.15□□□□□ -2.23
PRPF39-208ENST00000554785 IDSP22304 550 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 ADORA2BP29275 332 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 CD70P32970 193 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 ADRA1AP35348 466 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 UGT1A3P35503 534 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 CCT6AP40227 531 aaKnown RBP1.15□□□□□ -2.23
PRPF39-208ENST00000554785 PTGFRP43088 359 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 FNTAP49354 379 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 EMDP50402 254 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 MAP3K7CLP57077 242 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 RPS14P62263 151 aaKnown RBP1.15□□□□□ -2.23
PRPF39-208ENST00000554785 PAX2Q02962 417 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 CDC20Q12834 499 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 C16orf72Q14CZ0 275 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 UBE2V2Q15819 145 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 CST6Q15828 149 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 TIMM50Q3ZCQ8 353 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 CYBRD1Q53TN4 286 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 C10orf120Q5SQS8 335 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 TPRG1LQ5T0D9 272 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 ATAD3CQ5T2N8 411 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 SLX4IPQ5VYV7 408 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 KCTD16Q68DU8 428 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 CLEC18BQ6UXF7 455 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 ALKAL1Q6UXT8 129 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 GPR65Q8IYL9 337 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 BLIDQ8IZY5 108 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 GCNT2Q8N0V5 402 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 STK40Q8N2I9 435 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 CSGALNACT2Q8N6G5 542 aa1.15□□□□□ -2.23
PRPF39-208ENST00000554785 OR6K2Q8NGY2 324 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms