RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 RYKP34925 604 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 LIPAP38571 399 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 YAP1P46937 504 aaKnown RBP5.67□□□□□ -1.5
SCFD1-212ENST00000554486 P2RX1P51575 399 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 CCR4P51679 360 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 TOMM34Q15785 309 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-212ENST00000554486 PLPPR5Q32ZL2 321 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 ZFP1Q6P2D0 407 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 ARSKQ6UWY0 536 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 DEF8Q6ZN54 512 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 Q6ZS92 163 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 PIWIL3Q7Z3Z3 882 aaKnown RBP5.67□□□□□ -1.5
SCFD1-212ENST00000554486 GALNTL5Q7Z4T8 443 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 PLCZ1Q86YW0 608 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 TMCO5AQ8N6Q1 288 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 EXD3Q8N9H8 876 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 TOR1AIP2Q8NFQ8 470 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 OR1J4Q8NGS1 313 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 LRRC46Q96FV0 321 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 ZNF597Q96LX8 424 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 C5orf34Q96MH7 638 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 ZNF300Q96RE9 604 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-212ENST00000554486 MCHR1Q99705 422 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 NPAS1Q99742 590 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 FAM173AQ9BQD7 235 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 ADNPQ9H2P0 1102 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 S100A14Q9HCY8 104 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 CTPS2Q9NRF8 586 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 SDHAF3Q9NRP4 125 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 VNN3Q9NY84 501 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 ACAD8Q9UKU7 415 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 A4GNTQ9UNA3 340 aa5.67□□□□□ -1.5
SCFD1-212ENST00000554486 A0A1B0GWA3 101 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 CPSF4LA6NMK7 179 aaKnown RBP5.66□□□□□ -1.5
SCFD1-212ENST00000554486 MPPED1O15442 326 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 ZIC3O60481 467 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 CDC40O60508 579 aaKnown RBP eCLIP5.66□□□□□ -1.5
SCFD1-212ENST00000554486 DPM1O60762 260 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 GLSO94925 669 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-212ENST00000554486 NTN1O95631 604 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 CHRM2P08172 466 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 HOXB6P17509 224 aaKnown RBP5.66□□□□□ -1.5
SCFD1-212ENST00000554486 PGCP20142 388 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 ELAVL4P26378 380 aaKnown RBP5.66□□□□□ -1.5
SCFD1-212ENST00000554486 RFC3P40938 356 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 SLC6A8P48029 635 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 IDH2P48735 452 aaKnown RBP5.66□□□□□ -1.5
SCFD1-212ENST00000554486 DLX5P56178 289 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 BLOC1S1P78537 153 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 PMP22Q01453 160 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 CBFBQ13951 182 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 ZNF169Q14929 603 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-212ENST00000554486 QPRTQ15274 297 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 RCN1Q15293 331 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 OR1Q1Q15612 314 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 HYAL4Q2M3T9 481 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 TMEM44Q2T9K0 475 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 SLC25A53Q5H9E4 307 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 ENTPD8Q5MY95 495 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 HMBOX1Q6NT76 420 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 AAGABQ6PD74 315 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 WDR88Q6ZMY6 472 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 ASB18Q6ZVZ8 466 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 PLEKHM3Q6ZWE6 761 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 AMIGO2Q86SJ2 522 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 RANBP3LQ86VV4 465 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-212ENST00000554486 C10orf67Q8IYJ2 551 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 LSMEM1Q8N8F7 131 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 ZFP62Q8NB50 900 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-212ENST00000554486 TMEM178AQ8NBL3 297 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 OR4K17Q8NGC6 315 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 C9orf43Q8TAL5 461 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-212ENST00000554486 TM9SF4Q92544 642 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 C3orf49Q96BT1 292 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 PRRC1Q96M27 445 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 JSRP1Q96MG2 331 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-212ENST00000554486 PIP5K1AQ99755 562 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 PKP2Q99959 881 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 ZNF559Q9BR84 538 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 FUZQ9BT04 418 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 TRIM2Q9C040 744 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 WDR12Q9GZL7 423 aaKnown RBP5.66□□□□□ -1.5
SCFD1-212ENST00000554486 UBQLN3Q9H347 655 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 HHATLQ9HCP6 504 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 ZNF71Q9NQZ8 489 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-212ENST00000554486 MAN2C1Q9NTJ4 1040 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 ACER3Q9NUN7 267 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 MED17Q9NVC6 651 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 TAS2R10Q9NYW0 307 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 NKX1-2Q9UD57 310 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-212ENST00000554486 RIMS3Q9UJD0 308 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 BOKQ9UMX3 212 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-212ENST00000554486 C15orf41Q9Y2V0 281 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 AP4S1Q9Y587 144 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 IGSF10Q6WRI0 2623 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 GTF3C1Q12789 2109 aa5.66□□□□□ -1.5
SCFD1-212ENST00000554486 ZGRF1Q86YA3 2104 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 ZFYVE26Q68DK2 2539 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 A0A087WZY1 265 aa5.65□□□□□ -1.5
SCFD1-212ENST00000554486 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms