RNA–Protein interactions for RNA: ENST00000554042.1

AL450442.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL450442.1, Length 854 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL450442.1-201ENST00000554042 KCNIP1Q9NZI2 227 aa2.29□□□□□ -2.04
AL450442.1-201ENST00000554042 KCNIP3Q9Y2W7 256 aa2.29□□□□□ -2.04
AL450442.1-201ENST00000554042 NUP214P35658 2090 aaPredicted RBP2.29□□□□□ -2.04
AL450442.1-201ENST00000554042 LRCOL1A6NCL2 159 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 TRIM64CA6NLI5 447 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 TCP11X1B4DZS4 312 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 ANGPT2O15123 496 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 NOL3O60936 208 aaKnown RBP2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 ALDOBP05062 364 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 RETP07949 1114 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 RPL13AP40429 203 aaKnown RBP2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 ZNF136P52737 540 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 ATP1B3P54709 279 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 IRX3P78415 501 aaPredicted RBP2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 CDK16Q00536 496 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 EIF4EBP1Q13541 118 aaPredicted RBP2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 MOBPQ13875 183 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 FZD2Q14332 565 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 RFX4Q33E94 735 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 ANKDD1AQ495B1 522 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 OR4F3Q6IEY1 312 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 DHDDSQ86SQ9 333 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 ECHDC2Q86YB7 292 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 OR10G2Q8NGC3 310 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 MAIP1Q8WWC4 291 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 ACOT11Q8WXI4 607 aaPredicted RBP2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 STARD8Q92502 1023 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 UBE2E3Q969T4 207 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 DNAJC19Q96DA6 116 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 RAB34Q9BZG1 259 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 NHEJ1Q9H9Q4 299 aaPredicted RBP2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 POLE4Q9NR33 117 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 NECAP2Q9NVZ3 263 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 SNX6Q9UNH7 406 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 F11RQ9Y624 299 aaKnown RBP2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 IKBKGQ9Y6K9 419 aa2.28□□□□□ -2.04
AL450442.1-201ENST00000554042 CABIN1Q9Y6J0 2220 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 PTCH1Q13635 1447 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 POLR2DO15514 142 aaKnown RBP2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 WISP3O95389 354 aaPredicted RBP2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 ADRB3P13945 408 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 CCDC130P13994 396 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 LONP1P36776 959 aaKnown RBP2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 DUSP3P51452 185 aaPredicted RBP2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 NCBP2P52298 156 aaKnown RBP eCLIP2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 ASPHQ12797 758 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 OR5I1Q13606 314 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 SGCAQ16586 387 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 TMEM183BQ1AE95 376 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 FAM83EQ2M2I3 478 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 DEFB116Q30KQ4 102 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 CCDC152Q4G0S7 254 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 SFT2D3Q587I9 215 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 Q6ZR03 302 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 C6orf120Q7Z4R8 191 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 TMEM183AQ8IXX5 376 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 CYB561D1Q8N8Q1 229 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 FAM133AQ8N9E0 248 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 SLC22A8Q8TCC7 542 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 N4BP2L2Q92802 583 aaPredicted RBP2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 FGF14Q92915 247 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 ASB9Q96DX5 294 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 TM4SF19Q96DZ7 209 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 CLCC1Q96S66 551 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 UGT1A7Q9HAW7 530 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 UGT1A10Q9HAW8 530 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 UGT1A8Q9HAW9 530 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 LY9Q9HBG7 655 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 GIN1Q9NXP7 522 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 ZNF226Q9NYT6 803 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 CALYQ9NYX4 217 aa2.27□□□□□ -2.05
AL450442.1-201ENST00000554042 SYNJ2BP-COX16A0A087WUM0 186 aa2.26□□□□□ -2.05
AL450442.1-201ENST00000554042 PLAC8L1A1L4L8 177 aa2.26□□□□□ -2.05
AL450442.1-201ENST00000554042 C12orf71A8MTZ7 269 aa2.26□□□□□ -2.05
AL450442.1-201ENST00000554042 POU2F1P14859 743 aa2.26□□□□□ -2.05
AL450442.1-201ENST00000554042 ZNF30P17039 623 aa2.26□□□□□ -2.05
AL450442.1-201ENST00000554042 CCR1P32246 355 aa2.26□□□□□ -2.05
AL450442.1-201ENST00000554042 HERVK_113P61574 105 aa2.26□□□□□ -2.05
AL450442.1-201ENST00000554042 TNFRSF17Q02223 184 aa2.26□□□□□ -2.05
AL450442.1-201ENST00000554042 MESDQ14696 234 aa2.26□□□□□ -2.05
AL450442.1-201ENST00000554042 KCTD19Q17RG1 926 aaPredicted RBP2.26□□□□□ -2.05
AL450442.1-201ENST00000554042 LINC00173Q6ZV60 143 aa2.26□□□□□ -2.05
AL450442.1-201ENST00000554042 CAMK2N1Q7Z7J9 78 aa2.26□□□□□ -2.05
AL450442.1-201ENST00000554042 CCDC50Q8IVM0 306 aa2.26□□□□□ -2.05
AL450442.1-201ENST00000554042 ZADH2Q8N4Q0 377 aa2.26□□□□□ -2.05
AL450442.1-201ENST00000554042 ZNF606Q8WXB4 792 aa2.26□□□□□ -2.05
AL450442.1-201ENST00000554042 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.26□□□□□ -2.05
AL450442.1-201ENST00000554042 TRIM44Q96DX7 344 aaPredicted RBP2.26□□□□□ -2.05
AL450442.1-201ENST00000554042 NPAS2Q99743 824 aa2.26□□□□□ -2.05
AL450442.1-201ENST00000554042 RIOK2Q9BVS4 552 aaKnown RBP2.26□□□□□ -2.05
AL450442.1-201ENST00000554042 NT5C3AQ9H0P0 336 aa2.26□□□□□ -2.05
AL450442.1-201ENST00000554042 SPATA7Q9P0W8 599 aa2.26□□□□□ -2.05
AL450442.1-201ENST00000554042 XCL2Q9UBD3 114 aa2.26□□□□□ -2.05
AL450442.1-201ENST00000554042 EXTL2Q9UBQ6 330 aa2.26□□□□□ -2.05
AL450442.1-201ENST00000554042 RPAP1Q9BWH6 1393 aaPredicted RBP2.25□□□□□ -2.05
AL450442.1-201ENST00000554042 IGKV2-28A0A075B6P5 120 aa2.25□□□□□ -2.05
AL450442.1-201ENST00000554042 IGKV1D-13A0A0B4J2D9 117 aa2.25□□□□□ -2.05
AL450442.1-201ENST00000554042 OR5B21A6NL26 309 aa2.25□□□□□ -2.05
AL450442.1-201ENST00000554042 TOM1O60784 492 aa2.25□□□□□ -2.05
AL450442.1-201ENST00000554042 SNNO75324 88 aaPredicted RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms