RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 SIRPB1O00241 398 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 NDUFAB1O14561 156 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 GOSR2O14653 212 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 ZNF354AO60765 605 aaPredicted RBP3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 IGHV3-48P01763 117 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 C2P06681 752 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 SERPINE2P07093 398 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 OR8U8P0C7N1 319 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 PRR23D2P0DMB1 279 aaPredicted RBP3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 PRKACAP17612 351 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 MSR1P21757 451 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 GTF2E2P29084 291 aaKnown RBP3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 CASQ1P31415 396 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 SHMT2P34897 504 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 TMED10P49755 219 aaKnown RBP3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 ETV1P50549 477 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 GPM6AP51674 278 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 SH3BGRP55822 239 aaPredicted RBP3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 CLDN18P56856 261 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 RAB11AP62491 216 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 FCN2Q15485 313 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 RAB11BQ15907 218 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 KLHL22Q53GT1 634 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 AADACL4Q5VUY2 407 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 TRIM40Q6P9F5 258 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 SLC16A14Q7RTX9 510 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 MMAAQ8IVH4 418 aaKnown RBP3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 IQCKQ8N0W5 287 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 PDCL2Q8N4E4 241 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 POM121L12Q8N7R1 296 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 CCDC71LQ8N9Z2 235 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 OR9G4Q8NGQ1 327 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 PIBF1Q8WXW3 757 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 FGGYQ96C11 551 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 ITCHQ96J02 903 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 GSDMAQ96QA5 445 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 SORT1Q99523 831 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 SLC29A1Q99808 456 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 BLZF1Q9H2G9 400 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 RGCCQ9H4X1 137 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 ZNF702PQ9H963 129 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 MRPL22Q9NWU5 206 aaKnown RBP3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 CLN8Q9UBY8 286 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 DCDC2Q9UHG0 476 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 PCNX3Q9H6A9 2034 aa3.05□□□□□ -1.92
LSM6P2-201ENST00000552208 NOTCH4Q99466 2003 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 MROH7-TTC4A0A0A0MT08 1334 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 LRRIQ3A6PVS8 624 aaPredicted RBP3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 WWP2O00308 870 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 MRPS12O15235 138 aaKnown RBP3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 LYPLA1O75608 230 aaPredicted RBP3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 BBOX1O75936 387 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 SNAI1O95863 264 aaPredicted RBP3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 KLK3P07288 261 aaPredicted RBP3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 PLEKP08567 350 aaPredicted RBP3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 MYL2P10916 166 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 CXCR2P25025 360 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 DCKP27707 260 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 MDH2P40926 338 aaKnown RBP3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 NPBWR2P48146 333 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 CX3CR1P49238 355 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 KLK7P49862 253 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 BCL2L1Q07817 233 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 DNAJC3Q13217 504 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 TIMM50Q3ZCQ8 353 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 XKR4Q5GH76 650 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 OLFML2AQ68BL7 652 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 TWF2Q6IBS0 349 aaKnown RBP3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 PAMR1Q6UXH9 720 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 STXBP4Q6ZWJ1 553 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 ARCQ7LC44 396 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 SLC26A11Q86WA9 606 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 C8orf31Q8N9H6 132 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 ACOT4Q8N9L9 421 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 MAPK1IP1LQ8NDC0 245 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 RHEBL1Q8TAI7 183 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 STMN2Q93045 179 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 KIAA1143Q96AT1 154 aaPredicted RBP3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 SLC25A38Q96DW6 304 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 CCDC126Q96EE4 140 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 DUS3LQ96G46 650 aaKnown RBP3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 HIST1H4GQ99525 98 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 ZNF184Q99676 751 aaPredicted RBP3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 TMEM246Q9BRR3 403 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 PAXXQ9BUH6 204 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 KRTAP1-5Q9BYS1 174 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 ACTR6Q9GZN1 396 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 Q9H3A6 140 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 B4GALT7Q9UBV7 327 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 APOBEC3BQ9UH17 382 aaKnown RBP3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 LSM7Q9UK45 103 aaKnown RBP3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 FLVCR1Q9Y5Y0 555 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 V9GY05 133 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 GON4LQ3T8J9 2241 aa3.04□□□□□ -1.92
LSM6P2-201ENST00000552208 TMEM94Q12767 1356 aa3.03□□□□□ -1.92
LSM6P2-201ENST00000552208 FANCIQ9NVI1 1328 aa3.03□□□□□ -1.92
LSM6P2-201ENST00000552208 SMCO2A6NFE2 343 aa3.03□□□□□ -1.92
LSM6P2-201ENST00000552208 ZNF701M0R085 212 aaPredicted RBP3.03□□□□□ -1.92
LSM6P2-201ENST00000552208 AIM2O14862 343 aa3.03□□□□□ -1.92
LSM6P2-201ENST00000552208 SOX15O60248 233 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms