RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 TMEM238C9JI98 176 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 SMIM22K7EJ46 135 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 DYNC1I1O14576 645 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 TM9SF1O15321 606 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 SLC16A4O15374 487 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 PPIHO43447 177 aaKnown RBP5.41□□□□□ -1.54
VPS29-210ENST00000552130 WDR1O75083 606 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 RHOCP08134 193 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 FAM106CPP0CH98 169 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 BCKDHAP12694 445 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 ATF6P18850 670 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 ATP5A1P25705 553 aaKnown RBP5.41□□□□□ -1.54
VPS29-210ENST00000552130 BTG1P62324 171 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 MYL7Q01449 175 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 CKAP4Q07065 602 aaKnown RBP5.41□□□□□ -1.54
VPS29-210ENST00000552130 RIPPLY1Q0D2K3 151 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 ST3GAL3Q11203 375 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 RAB40BQ12829 278 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 GPR17Q13304 367 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 ITPK1Q13572 414 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 MAD2L1BPQ15013 274 aaPredicted RBP5.41□□□□□ -1.54
VPS29-210ENST00000552130 PSG5Q15238 335 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 ZNHIT3Q15649 155 aaPredicted RBP5.41□□□□□ -1.54
VPS29-210ENST00000552130 ATP6V1FQ16864 119 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 AKIRIN2Q53H80 203 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 ZNF554Q86TJ5 538 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 HIPK1Q86Z02 1210 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 ENTHD1Q8IYW4 607 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 ZFP82Q8N141 532 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 TMEM251Q8N6I4 163 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 KIR3DL3Q8N743 410 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 CCDC71LQ8N9Z2 235 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 OR5B17Q8NGF7 314 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 OR6Q1Q8NGQ2 317 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 OR2Y1Q8NGV0 311 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 OLIG1Q8TAK6 271 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 OSR1Q8TAX0 266 aaPredicted RBP5.41□□□□□ -1.54
VPS29-210ENST00000552130 HGDQ93099 445 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 ABTB1Q969K4 478 aaPredicted RBP5.41□□□□□ -1.54
VPS29-210ENST00000552130 FAF2Q96CS3 445 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 LGMNQ99538 433 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 ING2Q9H160 280 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 C3orf14Q9HBI5 128 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 SDR39U1Q9NRG7 319 aaPredicted RBP5.41□□□□□ -1.54
VPS29-210ENST00000552130 BABAM2Q9NXR7 383 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 STOML2Q9UJZ1 356 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 LSM7Q9UK45 103 aaKnown RBP5.41□□□□□ -1.54
VPS29-210ENST00000552130 FBXL3Q9UKT7 428 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 SPATA2Q9UM82 520 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 DHRS7Q9Y394 339 aa5.41□□□□□ -1.54
VPS29-210ENST00000552130 A0A0G2JNG1 304 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 PSMB11A5LHX3 300 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 ANHXE9PGG2 379 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 K7EN84 100 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 hCG_2039718K7EN88 272 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 M0R036 132 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 PLPP1O14494 284 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 GJB5O95377 273 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 UTS2O95399 124 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 TNNC2P02585 160 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 FAM157CP0CG43 387 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 CALM1P0DP23 149 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 CALM2P0DP24 149 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 CALM3P0DP25 149 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 DTYMKP23919 212 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 ARR3P36575 388 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 VHLP40337 213 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 EMDP50402 254 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 C2orf54Q08AI8 447 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 DPYSL3Q14195 570 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 ZNF234Q14588 700 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 KIR2DS5Q14953 304 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 HLFQ16534 295 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 GUK1Q16774 197 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 FAM153CQ494X1 144 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 RBM48Q5RL73 367 aaKnown RBP5.4□□□□□ -1.54
VPS29-210ENST00000552130 WASHC2DQ5SRD0 308 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 OR2G6Q5TZ20 316 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 SDHAF4Q5VUM1 108 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 FAHD2BQ6P2I3 314 aaPredicted RBP5.4□□□□□ -1.54
VPS29-210ENST00000552130 ATRAIDQ6UW56 229 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 Q6ZNX1 250 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 SLC16A12Q6ZSM3 486 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 BHLHA9Q7RTU4 235 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 OR2L13Q8N349 312 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 C2orf73Q8N5S3 287 aaPredicted RBP5.4□□□□□ -1.54
VPS29-210ENST00000552130 GVQW1Q8N7I0 195 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 ATP6V0D2Q8N8Y2 350 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 OR52H1Q8NGJ2 320 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 OR5AK3PQ8NH89 298 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 RNASEH2CQ8TDP1 164 aaKnown RBP5.4□□□□□ -1.54
VPS29-210ENST00000552130 RORBQ92753 470 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 FAHD2AQ96GK7 314 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 CCDC42Q96M95 316 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 CSF3RQ99062 836 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 RNF2Q99496 336 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 IL12RB2Q99665 862 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 KLHDC3Q9BQ90 382 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 COPS4Q9BT78 406 aa5.4□□□□□ -1.54
VPS29-210ENST00000552130 CHRNA10Q9GZZ6 450 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms