RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 NANSQ9NR45 359 aa13.57□□□□□ -0.24
PRPF40B-211ENST00000551063 EGFL7Q9UHF1 273 aa13.57□□□□□ -0.24
PRPF40B-211ENST00000551063 A4GNTQ9UNA3 340 aa13.57□□□□□ -0.24
PRPF40B-211ENST00000551063 NOX1Q9Y5S8 564 aa13.57□□□□□ -0.24
PRPF40B-211ENST00000551063 HTR3EA5X5Y0 456 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 ZNF587BE7ETH6 402 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 MS4A18H0YCH9 400 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 PLPP3O14495 311 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 SLC43A1O75387 559 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 ZNF432O94892 652 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 CH25HO95992 272 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 HPRP00739 348 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 MT-ND1P03886 318 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 NCK1P16333 377 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 DNASE1P24855 282 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 UGT2B15P54855 530 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 FOXG1P55316 489 aaPredicted RBP13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 SLC25A3Q00325 362 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 IL1RL1Q01638 556 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 POU3F1Q03052 451 aaPredicted RBP13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 GABRA6Q16445 453 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 MS4A18Q3C1V0 323 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 FKBP9P1Q75LS8 142 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 PXKQ7Z7A4 578 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 RNF148Q8N7C7 305 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 PIK3C3Q8NEB9 887 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 ANKK1Q8NFD2 765 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 PLPPR2Q96GM1 343 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 BOD1Q96IK1 185 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 ALKBH3Q96Q83 286 aaPredicted RBP13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 TMEM204Q9BSN7 226 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 ESRP2Q9H6T0 727 aaKnown RBP13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 GORASP2Q9H8Y8 452 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 MEPEQ9NQ76 525 aaPredicted RBP13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 MAGEL2Q9UJ55 1249 aa13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 SAMD4AQ9UPU9 718 aaKnown RBP13.56□□□□□ -0.24
PRPF40B-211ENST00000551063 HIVEP1P15822 2718 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 UPK3AO75631 287 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 KRT33AO76009 404 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 ATE1O95260 518 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 RAF1P04049 648 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 ASAH2BP0C7U1 165 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 CALB2P22676 271 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 HOXC12P31275 282 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 SH3BGRP55822 239 aaPredicted RBP13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 MXRA7P84157 204 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 ZP4Q12836 540 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 NHLRC1Q6VVB1 395 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 ZNF704Q6ZNC4 412 aaPredicted RBP13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 SLC46A3Q7Z3Q1 461 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 NANOGNBQ7Z5D8 188 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 DEFB107AQ8IZN7 70 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 TMEM123Q8N131 208 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 TMEM255BQ8WV15 326 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 LIPHQ8WWY8 451 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 MBD6Q96DN6 1003 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 NSL1Q96IY1 281 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 CDRT15Q96T59 188 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 LIME1Q9H400 295 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 DCAF13Q9NV06 445 aaKnown RBP13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 CD300AQ9UGN4 299 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 PLEKHA6Q9Y2H5 1048 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 AMDHD2Q9Y303 409 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 MED31Q9Y3C7 131 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 SLC25A15Q9Y619 301 aa13.55□□□□□ -0.24
PRPF40B-211ENST00000551063 C2CD3Q4AC94 2353 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 RPL36A-HNRNPH2H7BZ11 118 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 OR7A10O76100 309 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 OR6A2O95222 327 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 ADORA3P0DMS8 318 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 UMPSP11172 480 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 HLA-DOBP13765 273 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 AHCYP23526 432 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 IST1P53990 364 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 TRAM2Q15035 370 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 NCMAPQ5T1S8 102 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 ALKBH2Q6NS38 261 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 C20orf204Q6ZNR8 217 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 CYP4Z1Q86W10 505 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 PFN4Q8NHR9 129 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 SGTBQ96EQ0 304 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 OR2M2Q96R28 347 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 FNDC11Q9BVV2 318 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 ANKRD19PQ9H560 264 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 OBP2BQ9NPH6 170 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 SLC17A5Q9NRA2 495 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 MAN2C1Q9NTJ4 1040 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 RNF115Q9Y4L5 304 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 MAGED1Q9Y5V3 778 aaPredicted RBP13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 SNX13Q9Y5W8 968 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 ENPP4Q9Y6X5 453 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 MED13LQ71F56 2210 aa13.54□□□□□ -0.24
PRPF40B-211ENST00000551063 FFAR1O14842 300 aa13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 PRSS23O95084 383 aa13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 HIST1H2ABP04908 130 aa13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 CD3EP07766 207 aa13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 TCN1P20061 433 aaPredicted RBP13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 YAP1P46937 504 aaKnown RBP13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 ROR2Q01974 943 aaKnown RBP13.53□□□□□ -0.24
PRPF40B-211ENST00000551063 KEAP1Q14145 624 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms