RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 CLDN19Q8N6F1 224 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 C4orf32Q8N8J7 132 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 ZNF491Q8N8L2 437 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 BBOF1Q8ND07 529 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 MIPOL1Q8TD10 442 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 AENQ8WTP8 325 aaKnown RBP4.28□□□□□ -1.72
CPSF6-206ENST00000550987 MAIP1Q8WWC4 291 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 CRYGNQ8WXF5 182 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 FAM3CQ92520 227 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 C11orf24Q96F05 449 aaPredicted RBP4.28□□□□□ -1.72
CPSF6-206ENST00000550987 C9orf85Q96MD7 179 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 TGM7Q96PF1 710 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 PLIN2Q99541 437 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 LRRC61Q9BV99 259 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 API5Q9BZZ5 524 aaKnown RBP4.28□□□□□ -1.72
CPSF6-206ENST00000550987 MLXQ9UH92 298 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 CDH9Q9ULB4 789 aa4.28□□□□□ -1.72
CPSF6-206ENST00000550987 PDCD11Q14690 1871 aaKnown RBP4.28□□□□□ -1.72
CPSF6-206ENST00000550987 ZSCAN5BA6NJL1 495 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 KRTAP29-1A8MX34 341 aaPredicted RBP4.27□□□□□ -1.73
CPSF6-206ENST00000550987 RSPH10B2B2RC85 870 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 NPIPA7E9PJI5 369 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 GPRIN2O60269 458 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 ZG16O60844 167 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 ALOX5P09917 674 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 RSPH10BP0C881 870 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 NPIPA8P0DM63 369 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 ACADSP16219 412 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 NCF2P19878 526 aaPredicted RBP4.27□□□□□ -1.73
CPSF6-206ENST00000550987 CDH5P33151 784 aaPredicted RBP4.27□□□□□ -1.73
CPSF6-206ENST00000550987 HPCAL1P37235 193 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 TAGLN2P37802 199 aaKnown RBP4.27□□□□□ -1.73
CPSF6-206ENST00000550987 ACTR3P61158 418 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 CD300CQ08708 224 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 IL18R1Q13478 541 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 GANABQ14697 944 aaKnown RBP4.27□□□□□ -1.73
CPSF6-206ENST00000550987 C9orf66Q5T8R8 295 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 ZYG11AQ6WRX3 759 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 Q6ZPB1 254 aaPredicted RBP4.27□□□□□ -1.73
CPSF6-206ENST00000550987 CCDC50Q8IVM0 306 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 MTURNQ8N3F0 131 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 Q8N9G6 341 aaPredicted RBP4.27□□□□□ -1.73
CPSF6-206ENST00000550987 M1APQ8TC57 530 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 SETD7Q8WTS6 366 aaKnown RBP4.27□□□□□ -1.73
CPSF6-206ENST00000550987 IL1F10Q8WWZ1 152 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 SLC41A3Q96GZ6 507 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 TPD52L3Q96J77 140 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 C12orf66Q96MD2 445 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 ZNF578Q96N58 590 aaPredicted RBP4.27□□□□□ -1.73
CPSF6-206ENST00000550987 AMDHD1Q96NU7 426 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 SLC6A7Q99884 636 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 XKR8Q9H6D3 395 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 HEXA-AS1Q9H8Q6 139 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 GLRX2Q9NS18 164 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 PSME2Q9UL46 239 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 NPIPA1Q9UND3 350 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 MOB4Q9Y3A3 225 aa4.27□□□□□ -1.73
CPSF6-206ENST00000550987 KNTC1P50748 2209 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 RAD50Q92878 1312 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 TRAV26-1A0A087WT03 109 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 IGKV6D-41A0A0C4DH26 115 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 A0A1W2PNV4 684 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 ESYT2A0FGR8 921 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 FAM47DPA6NHR8 397 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 FOXI3A8MTJ6 420 aaPredicted RBP4.26□□□□□ -1.73
CPSF6-206ENST00000550987 NDUFS8O00217 210 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 RAMP1O60894 148 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 ZNF254O75437 659 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 CIB2O75838 187 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 F10P00742 488 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 HCKP08631 526 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 POLR2MP0CAP2 368 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 CCDC130P13994 396 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 PGCP20142 388 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 TBXA2RP21731 343 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 HMGCLP35914 325 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 RPL4P36578 427 aaKnown RBP4.26□□□□□ -1.73
CPSF6-206ENST00000550987 ACVR1BP36896 505 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 CRYBB1P53674 252 aaPredicted RBP4.26□□□□□ -1.73
CPSF6-206ENST00000550987 MS4A2Q01362 244 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 PUDPQ08623 228 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 PEX6Q13608 980 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 ESPL1Q14674 2120 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 DPYSL2Q16555 572 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 PCK2Q16822 640 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 CYP51A1Q16850 503 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 CFAP221Q4G0U5 840 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 FBXO48Q5FWF7 155 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 VWA2Q5GFL6 755 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 LGSNQ5TDP6 509 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 RFWD3Q6PCD5 774 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 CDH26Q8IXH8 852 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 KRT222Q8N1A0 295 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 UBE2J2Q8N2K1 259 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 PDCL2Q8N4E4 241 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 FNDC8Q8TC99 324 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 AGR3Q8TD06 166 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 C18orf12Q96KH6 178 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 SH3GL1Q99961 368 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 TUBGCP2Q9BSJ2 902 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms