RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 GABARAPO95166 117 aa17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 NAGAP17050 411 aa17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 BMP7P18075 431 aa17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 CCNA2P20248 432 aa17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 ABCD3P28288 659 aa17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 PCSK6P29122 969 aa17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 SLC9A3P48764 834 aa17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 NRG3P56975 720 aa17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 ZNF91Q05481 1191 aa17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 KLHL22Q53GT1 634 aa17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 HSDL2Q6YN16 418 aa17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 ZNF367Q7RTV3 350 aa17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 NUP54Q7Z3B4 507 aa17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 MEX3DQ86XN8 651 aaKnown RBP17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 LNX2Q8N448 690 aa17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 PHOSPHO1Q8TCT1 267 aa17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 C3orf49Q96BT1 292 aa17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 TMEM80Q96HE8 168 aa17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 ADOQ96SZ5 270 aa17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 LPAR4Q99677 370 aa17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 UBQLN3Q9H347 655 aa17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 TP63Q9H3D4 680 aaPredicted RBP17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 HHATLQ9HCP6 504 aa17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 C20orf141Q9NUB4 165 aa17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 DNAJC27Q9NZQ0 273 aa17.98■□□□□ 0.47
CTDSP2-204ENST00000548823 A0A1B0GTH9 108 aa17.97■□□□□ 0.47
CTDSP2-204ENST00000548823 GTPBP1O00178 669 aaKnown RBP17.97■□□□□ 0.47
CTDSP2-204ENST00000548823 ICOSLGO75144 302 aa17.97■□□□□ 0.47
CTDSP2-204ENST00000548823 ATE1O95260 518 aa17.97■□□□□ 0.47
CTDSP2-204ENST00000548823 OC90Q02509 493 aaPredicted RBP17.97■□□□□ 0.47
CTDSP2-204ENST00000548823 EFR3AQ14156 821 aa17.97■□□□□ 0.47
CTDSP2-204ENST00000548823 CD226Q15762 336 aa17.97■□□□□ 0.47
CTDSP2-204ENST00000548823 PAPD4Q6PIY7 484 aaKnown RBP17.97■□□□□ 0.47
CTDSP2-204ENST00000548823 SMARCD3Q6STE5 483 aa17.97■□□□□ 0.47
CTDSP2-204ENST00000548823 APOOLQ6UXV4 268 aa17.97■□□□□ 0.47
CTDSP2-204ENST00000548823 SLC16A12Q6ZSM3 486 aa17.97■□□□□ 0.47
CTDSP2-204ENST00000548823 CADM2Q8N3J6 435 aa17.97■□□□□ 0.47
CTDSP2-204ENST00000548823 RNF217Q8TC41 542 aa17.97■□□□□ 0.47
CTDSP2-204ENST00000548823 FANK1Q8TC84 345 aa17.97■□□□□ 0.47
CTDSP2-204ENST00000548823 RFKQ969G6 155 aa17.97■□□□□ 0.47
CTDSP2-204ENST00000548823 LRR1Q96L50 414 aa17.97■□□□□ 0.47
CTDSP2-204ENST00000548823 SAMD8Q96LT4 415 aa17.97■□□□□ 0.47
CTDSP2-204ENST00000548823 TMEM43Q9BTV4 400 aa17.97■□□□□ 0.47
CTDSP2-204ENST00000548823 NAA50Q9GZZ1 169 aaKnown RBP17.97■□□□□ 0.47
CTDSP2-204ENST00000548823 FGF20Q9NP95 211 aaPredicted RBP17.97■□□□□ 0.47
CTDSP2-204ENST00000548823 IGHV3-20A0A0C4DH32 117 aa17.96■□□□□ 0.47
CTDSP2-204ENST00000548823 FAM171A2A8MVW0 826 aa17.96■□□□□ 0.47
CTDSP2-204ENST00000548823 BHLHE40O14503 412 aa17.96■□□□□ 0.47
CTDSP2-204ENST00000548823 FADS1O60427 444 aa17.96■□□□□ 0.47
CTDSP2-204ENST00000548823 LCKP06239 509 aa17.96■□□□□ 0.47
CTDSP2-204ENST00000548823 ADORA3P0DMS8 318 aa17.96■□□□□ 0.47
CTDSP2-204ENST00000548823 PSMB9P28065 219 aa17.96■□□□□ 0.47
CTDSP2-204ENST00000548823 FXYD6P3P58550 94 aa17.96■□□□□ 0.47
CTDSP2-204ENST00000548823 AADACL4Q5VUY2 407 aa17.96■□□□□ 0.47
CTDSP2-204ENST00000548823 SLC30A6Q6NXT4 461 aa17.96■□□□□ 0.47
CTDSP2-204ENST00000548823 ANKK1Q8NFD2 765 aa17.96■□□□□ 0.47
CTDSP2-204ENST00000548823 OR5L2Q8NGL0 311 aa17.96■□□□□ 0.47
CTDSP2-204ENST00000548823 LIPHQ8WWY8 451 aa17.96■□□□□ 0.47
CTDSP2-204ENST00000548823 PLEKHA8Q96JA3 519 aa17.96■□□□□ 0.47
CTDSP2-204ENST00000548823 RYDENQ9NUL5 291 aaKnown RBP17.96■□□□□ 0.47
CTDSP2-204ENST00000548823 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.96■□□□□ 0.478e-6■■■■□ 25
CTDSP2-204ENST00000548823 DIMT1Q9UNQ2 313 aaKnown RBP17.96■□□□□ 0.47
CTDSP2-204ENST00000548823 M0R3G1 203 aa17.95■□□□□ 0.46
CTDSP2-204ENST00000548823 CDK2AP1O14519 115 aa17.95■□□□□ 0.46
CTDSP2-204ENST00000548823 NME2P1O60361 137 aa17.95■□□□□ 0.46
CTDSP2-204ENST00000548823 NME2P22392 152 aa17.95■□□□□ 0.46
CTDSP2-204ENST00000548823 PMPCAQ10713 525 aa17.95■□□□□ 0.46
CTDSP2-204ENST00000548823 RAB40BQ12829 278 aa17.95■□□□□ 0.46
CTDSP2-204ENST00000548823 NDUFAF6Q330K2 333 aa17.95■□□□□ 0.46
CTDSP2-204ENST00000548823 NXNL2Q5VZ03 156 aa17.95■□□□□ 0.46
CTDSP2-204ENST00000548823 ATG4DQ86TL0 474 aaPredicted RBP17.95■□□□□ 0.46
CTDSP2-204ENST00000548823 MISPQ8IVT2 679 aa17.95■□□□□ 0.46
CTDSP2-204ENST00000548823 M1APQ8TC57 530 aa17.95■□□□□ 0.46
CTDSP2-204ENST00000548823 SGTBQ96EQ0 304 aa17.95■□□□□ 0.46
CTDSP2-204ENST00000548823 NPFFR2Q9Y5X5 522 aa17.95■□□□□ 0.46
CTDSP2-204ENST00000548823 M0R082 166 aa17.94■□□□□ 0.46
CTDSP2-204ENST00000548823 SLC22A1O15245 554 aa17.94■□□□□ 0.46
CTDSP2-204ENST00000548823 PRKNO60260 465 aaPredicted RBP17.94■□□□□ 0.46
CTDSP2-204ENST00000548823 MAN1A2O60476 641 aa17.94■□□□□ 0.46
CTDSP2-204ENST00000548823 SLC25A12O75746 678 aa17.94■□□□□ 0.46
CTDSP2-204ENST00000548823 HOXC12P31275 282 aa17.94■□□□□ 0.46
CTDSP2-204ENST00000548823 TGFBR2P37173 567 aa17.94■□□□□ 0.46
CTDSP2-204ENST00000548823 DLX5P56178 289 aa17.94■□□□□ 0.46
CTDSP2-204ENST00000548823 SLC26A5P58743 744 aa17.94■□□□□ 0.46
CTDSP2-204ENST00000548823 TMED1Q13445 227 aa17.94■□□□□ 0.46
CTDSP2-204ENST00000548823 CTF1Q16619 201 aa17.94■□□□□ 0.46
CTDSP2-204ENST00000548823 TIGD6Q17RP2 521 aa17.94■□□□□ 0.46
CTDSP2-204ENST00000548823 CLEC12AQ5QGZ9 265 aa17.94■□□□□ 0.46
CTDSP2-204ENST00000548823 RTL4Q6ZR62 310 aa17.94■□□□□ 0.46
CTDSP2-204ENST00000548823 P2RY8Q86VZ1 359 aa17.94■□□□□ 0.46
CTDSP2-204ENST00000548823 CDC20BQ86Y33 519 aa17.94■□□□□ 0.46
CTDSP2-204ENST00000548823 PRR22Q8IZ63 422 aa17.94■□□□□ 0.46
CTDSP2-204ENST00000548823 RPRMLQ8N4K4 120 aa17.94■□□□□ 0.46
CTDSP2-204ENST00000548823 ADAM19Q9H013 955 aa17.94■□□□□ 0.46
CTDSP2-204ENST00000548823 CARD8Q9Y2G2 431 aa17.94■□□□□ 0.46
CTDSP2-204ENST00000548823 FBN1P35555 2871 aaKnown RBP17.94■□□□□ 0.46
CTDSP2-204ENST00000548823 MPDZO75970 2070 aa17.94■□□□□ 0.46
CTDSP2-204ENST00000548823 TFECO14948 347 aaPredicted RBP17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 OIP5O43482 229 aa17.93■□□□□ 0.46
CTDSP2-204ENST00000548823 NDUFB5O43674 189 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms