RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 CUL9Q8IWT3 2517 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 PRR32B1ATL7 298 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 SLC16A7O60669 478 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 CD3GP09693 182 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 HLA-DOBP13765 273 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 TALDO1P37837 337 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 OR7A5Q15622 319 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 TMEM44Q2T9K0 475 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 RPL13AP3Q6NVV1 102 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 MDGA2Q7Z553 956 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 NSMAFQ92636 917 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 DERL3Q96Q80 235 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 ATF6BQ99941 703 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 SRRQ9GZT4 340 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 RXFP3Q9NSD7 469 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 NCDNQ9UBB6 729 aa11.56□□□□□ -0.56
SCAF11-209ENST00000547018 TRAV6A0A075B6T7 132 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 SUSD5O60279 629 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 MAS1P04201 325 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 RNF4P78317 190 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 BTBD16Q32M84 506 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 CARD17Q5XLA6 110 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 ZNF517Q6ZMY9 492 aaPredicted RBP11.55□□□□□ -0.56
SCAF11-209ENST00000547018 ADIPOR1Q96A54 375 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 NXF2Q9GZY0 626 aaKnown RBP11.55□□□□□ -0.56
SCAF11-209ENST00000547018 MED29Q9NX70 200 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 LAMP5Q9UJQ1 280 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 ZNF407Q9C0G0 2248 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 TCRBV16S1A1N1A0A5B0 115 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 OR2J2O76002 312 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 EIF4EP06730 217 aaKnown RBP11.55□□□□□ -0.56
SCAF11-209ENST00000547018 CD14P08571 375 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 NRG3P56975 720 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 SIRPAP78324 504 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 OR6V1Q8N148 313 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 ZNF485Q8NCK3 441 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 OR1N1Q8NGS0 311 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 TRMT10AQ8TBZ6 339 aaKnown RBP11.55□□□□□ -0.56
SCAF11-209ENST00000547018 EDAQ92838 391 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 GUCD1Q96NT3 240 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 POLE3Q9NRF9 147 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 CENPMQ9NSP4 180 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 NUFIP1Q9UHK0 495 aaKnown RBP11.55□□□□□ -0.56
SCAF11-209ENST00000547018 NPFFR2Q9Y5X5 522 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 CFAP47Q6ZTR5 3102 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 A0A075B6Q4 140 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 TMED7-TICAM2A0A0A6YYA0 188 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 PPM1BO75688 479 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 EVI2BP34910 448 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 LIMK1P53667 647 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 IGLV3-21P80748 117 aaPredicted RBP11.55□□□□□ -0.56
SCAF11-209ENST00000547018 MRPS15P82914 257 aaKnown RBP11.55□□□□□ -0.56
SCAF11-209ENST00000547018 CORO6Q6QEF8 472 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 ATG4DQ86TL0 474 aaPredicted RBP11.55□□□□□ -0.56
SCAF11-209ENST00000547018 LINC00346Q8IVM7 164 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 OR4M1Q8NGD0 313 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 OR10AC1Q8NH08 325 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 ZNF417Q8TAU3 575 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 C17orf50Q8WW18 174 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 DNASE2BQ8WZ79 361 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 TMCO6Q96DC7 493 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 ZNF587Q96SQ5 575 aaPredicted RBP11.55□□□□□ -0.56
SCAF11-209ENST00000547018 METTL7AQ9H8H3 244 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 NOX4Q9NPH5 578 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 MRPS18AQ9NVS2 196 aaKnown RBP11.55□□□□□ -0.56
SCAF11-209ENST00000547018 TAS2R10Q9NYW0 307 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 TMED7Q9Y3B3 224 aa11.55□□□□□ -0.56
SCAF11-209ENST00000547018 IGKV3-11P04433 115 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 KRT8P05787 483 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 EPHA8P29322 1005 aaPredicted RBP11.54□□□□□ -0.56
SCAF11-209ENST00000547018 GPLD1P80108 840 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 FMODQ06828 376 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 GRAMD2AQ8IUY3 354 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 ZNF676Q8N7Q3 588 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 AMELYQ99218 206 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 KCNG2Q9UJ96 466 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 EML6Q6ZMW3 1958 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 IGHV5-10-1A0A0J9YXX1 117 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 A0A1W2PNR3 127 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 LANCL1O43813 399 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 ZNF28P17035 718 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 ENDOUP21128 410 aaKnown RBP11.54□□□□□ -0.56
SCAF11-209ENST00000547018 SELENBP1Q13228 472 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 EXOSC6Q5RKV6 272 aaKnown RBP11.54□□□□□ -0.56
SCAF11-209ENST00000547018 LIPNQ5VXI9 398 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 SFXN4Q6P4A7 337 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 TMEM71Q6P5X7 295 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 DPY19L2P2Q6ZN68 376 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 PPP1R3BQ86XI6 285 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 RAB43Q86YS6 212 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 ARIH2OSQ8N7S6 290 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 ADAMTS18Q8TE60 1221 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 PGCP20142 388 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 RAB3BP20337 219 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 NANOS3P60323 173 aaKnown RBP11.54□□□□□ -0.56
SCAF11-209ENST00000547018 C19orf57Q0VDD7 668 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 NR0B2Q15466 257 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 ACKR1Q16570 336 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 AGAP7PQ5VUJ5 663 aa11.54□□□□□ -0.56
SCAF11-209ENST00000547018 OR7E24Q6IFN5 339 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms