RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 ZNF432O94892 652 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 OR5F1O95221 314 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 THRBP10828 461 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 PTNP21246 168 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 CBLP22681 906 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 PAX7P23759 505 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 PTAFRP25105 342 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 SH3BGRP55822 239 aaPredicted RBP13.95□□□□□ -0.18
DDX54-204ENST00000546898 TAS2R41P59536 307 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 SELENOWP63302 87 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 PMS2P3Q13401 168 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 MS4A18Q3C1V0 323 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 C9orf135Q5VTT2 229 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 KLHL24Q6TFL4 600 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 WDR88Q6ZMY6 472 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 DEF8Q6ZN54 512 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 TGIF2LYQ8IUE0 185 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 PIK3C3Q8NEB9 887 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 OR5J2Q8NH18 312 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 TMEM171Q8WVE6 324 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 IGFBPL1Q8WX77 278 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 FBXW5Q969U6 566 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 RADILQ96JH8 1075 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 PRSS27Q9BQR3 290 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 FKRPQ9H9S5 495 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 OBP2BQ9NPH6 170 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 ABCD2Q9UBJ2 740 aa13.95□□□□□ -0.18
DDX54-204ENST00000546898 LRRN3E7EW58 273 aa13.94□□□□□ -0.18
DDX54-204ENST00000546898 RPL36A-HNRNPH2H7BZ11 118 aa13.94□□□□□ -0.18
DDX54-204ENST00000546898 UPK3AO75631 287 aa13.94□□□□□ -0.18
DDX54-204ENST00000546898 WNT11O96014 354 aa13.94□□□□□ -0.18
DDX54-204ENST00000546898 IGF2P01344 180 aa13.94□□□□□ -0.18
DDX54-204ENST00000546898 TNFRSF1BP20333 461 aa13.94□□□□□ -0.18
DDX54-204ENST00000546898 RBM34P42696 430 aaKnown RBP13.94□□□□□ -0.18
DDX54-204ENST00000546898 GSK3BP49841 420 aa13.94□□□□□ -0.18
DDX54-204ENST00000546898 POU3F1Q03052 451 aaPredicted RBP13.94□□□□□ -0.18
DDX54-204ENST00000546898 ZNF74Q16587 644 aa13.94□□□□□ -0.18
DDX54-204ENST00000546898 ZNF672Q499Z4 452 aaPredicted RBP13.94□□□□□ -0.18
DDX54-204ENST00000546898 SHEQ5VZ18 495 aa13.94□□□□□ -0.18
DDX54-204ENST00000546898 HMBOX1Q6NT76 420 aa13.94□□□□□ -0.18
DDX54-204ENST00000546898 PXKQ7Z7A4 578 aa13.94□□□□□ -0.18
DDX54-204ENST00000546898 ALPK2Q86TB3 2170 aa13.94□□□□□ -0.18
DDX54-204ENST00000546898 TMEM123Q8N131 208 aa13.94□□□□□ -0.18
DDX54-204ENST00000546898 WDR31Q8NA23 367 aa13.94□□□□□ -0.18
DDX54-204ENST00000546898 KBTBD8Q8NFY9 601 aa13.94□□□□□ -0.18
DDX54-204ENST00000546898 OR1K1Q8NGR3 316 aa13.94□□□□□ -0.18
DDX54-204ENST00000546898 LILRB1Q8NHL6 650 aaPredicted RBP13.94□□□□□ -0.18
DDX54-204ENST00000546898 NANSQ9NR45 359 aa13.94□□□□□ -0.18
DDX54-204ENST00000546898 ZNF229Q9UJW7 825 aa13.94□□□□□ -0.18
DDX54-204ENST00000546898 CXCR6O00574 342 aa13.93□□□□□ -0.18
DDX54-204ENST00000546898 PLPP3O14495 311 aa13.93□□□□□ -0.18
DDX54-204ENST00000546898 ABCD4O14678 606 aa13.93□□□□□ -0.18
DDX54-204ENST00000546898 GSTA4O15217 222 aa13.93□□□□□ -0.18
DDX54-204ENST00000546898 ARHGEF9O43307 516 aa13.93□□□□□ -0.18
DDX54-204ENST00000546898 HPRP00739 348 aa13.93□□□□□ -0.18
DDX54-204ENST00000546898 IFNA8P32881 189 aa13.93□□□□□ -0.18
DDX54-204ENST00000546898 OR1E2P47887 323 aa13.93□□□□□ -0.18
DDX54-204ENST00000546898 ZNF83P51522 516 aa13.93□□□□□ -0.18
DDX54-204ENST00000546898 GYS2P54840 703 aa13.93□□□□□ -0.18
DDX54-204ENST00000546898 PRPS1P60891 318 aa13.93□□□□□ -0.18
DDX54-204ENST00000546898 PSME3P61289 254 aa13.93□□□□□ -0.18
DDX54-204ENST00000546898 ROR2Q01974 943 aaKnown RBP13.93□□□□□ -0.18
DDX54-204ENST00000546898 LINGO2Q7L985 606 aa13.93□□□□□ -0.18
DDX54-204ENST00000546898 GPR137CQ8N3F9 429 aa13.93□□□□□ -0.18
DDX54-204ENST00000546898 MAGEE2Q8TD90 523 aaPredicted RBP13.93□□□□□ -0.18
DDX54-204ENST00000546898 TPD52L3Q96J77 140 aa13.93□□□□□ -0.18
DDX54-204ENST00000546898 PRRC1Q96M27 445 aa13.93□□□□□ -0.18
DDX54-204ENST00000546898 OR2M2Q96R28 347 aa13.93□□□□□ -0.18
DDX54-204ENST00000546898 GSX2Q9BZM3 304 aa13.93□□□□□ -0.18
DDX54-204ENST00000546898 CXorf56Q9H5V9 222 aa13.93□□□□□ -0.18
DDX54-204ENST00000546898 MOV10Q9HCE1 1003 aaKnown RBP13.93□□□□□ -0.18
DDX54-204ENST00000546898 SPAG4Q9NPE6 437 aa13.93□□□□□ -0.18
DDX54-204ENST00000546898 ARL2BPQ9Y2Y0 163 aa13.93□□□□□ -0.18
DDX54-204ENST00000546898 ZNF469Q96JG9 3925 aaPredicted RBP13.92□□□□□ -0.18
DDX54-204ENST00000546898 ACANP16112 2415 aa13.92□□□□□ -0.18
DDX54-204ENST00000546898 ARPC4-TTLL3A0A0A6YYG9 625 aa13.92□□□□□ -0.18
DDX54-204ENST00000546898 A0A1W2PR80 420 aa13.92□□□□□ -0.18
DDX54-204ENST00000546898 KPNA4O00629 521 aaPredicted RBP13.92□□□□□ -0.18
DDX54-204ENST00000546898 DCTN3O75935 186 aa13.92□□□□□ -0.18
DDX54-204ENST00000546898 OR6A2O95222 327 aa13.92□□□□□ -0.18
DDX54-204ENST00000546898 CH25HO95992 272 aa13.92□□□□□ -0.18
DDX54-204ENST00000546898 MT-ND1P03886 318 aa13.92□□□□□ -0.18
DDX54-204ENST00000546898 ADORA3P0DMS8 318 aa13.92□□□□□ -0.18
DDX54-204ENST00000546898 HOXB1P14653 301 aaPredicted RBP13.92□□□□□ -0.18
DDX54-204ENST00000546898 PAX1P15863 534 aa13.92□□□□□ -0.18
DDX54-204ENST00000546898 CDH2P19022 906 aaPredicted RBP13.92□□□□□ -0.18
DDX54-204ENST00000546898 CD40P25942 277 aa13.92□□□□□ -0.18
DDX54-204ENST00000546898 CDH11P55287 796 aa13.92□□□□□ -0.18
DDX54-204ENST00000546898 ADAM8P78325 824 aa13.92□□□□□ -0.18
DDX54-204ENST00000546898 NKX6-1P78426 367 aaPredicted RBP13.92□□□□□ -0.18
DDX54-204ENST00000546898 SLC25A3Q00325 362 aa13.92□□□□□ -0.18
DDX54-204ENST00000546898 LGALS3BPQ08380 585 aa13.92□□□□□ -0.18
DDX54-204ENST00000546898 ZP4Q12836 540 aa13.92□□□□□ -0.18
DDX54-204ENST00000546898 PIN1Q13526 163 aaPredicted RBP13.92□□□□□ -0.18
DDX54-204ENST00000546898 TBRG1Q3YBR2 411 aa13.92□□□□□ -0.18
DDX54-204ENST00000546898 CBLL1Q75N03 491 aa13.92□□□□□ -0.18
DDX54-204ENST00000546898 PIGWQ7Z7B1 504 aa13.92□□□□□ -0.18
DDX54-204ENST00000546898 LRR1Q96L50 414 aa13.92□□□□□ -0.18
DDX54-204ENST00000546898 HS6ST2Q96MM7 605 aa13.92□□□□□ -0.18
DDX54-204ENST00000546898 KCTD14Q9BQ13 255 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms