RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 SLC19A1P41440 591 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 MALLQ13021 153 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 EBPQ15125 230 aaKnown RBP11.88□□□□□ -0.51
PTCH1-212ENST00000546744 SYPL1Q16563 259 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 FXNQ16595 210 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 ZNF808Q8N4W9 903 aaPredicted RBP11.88□□□□□ -0.51
PTCH1-212ENST00000546744 SEC22AQ96IW7 307 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 ZNF768Q9H5H4 540 aaKnown RBP11.88□□□□□ -0.51
PTCH1-212ENST00000546744 HRASLSQ9HDD0 168 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 PRSS16Q9NQE7 514 aa11.88□□□□□ -0.51
PTCH1-212ENST00000546744 RAC2P15153 192 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 PRLHRP49683 370 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 EPHA5P54756 1037 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 RBM39Q14498 530 aaKnown RBP11.87□□□□□ -0.51
PTCH1-212ENST00000546744 LGI3Q8N145 548 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 FAM160A2Q8N612 972 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-212ENST00000546744 FAM3DQ96BQ1 224 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 OR8D2Q9GZM6 311 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 WDR76Q9H967 626 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 CHRNA9Q9UGM1 479 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 PLAGL1Q9UM63 463 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 ATAD5Q96QE3 1844 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 A0A1W2PPV4 95 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 LEFTY2O00292 366 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 SCGB2A1O75556 95 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 SOD2P04179 222 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 RPS21P63220 83 aaKnown RBP11.87□□□□□ -0.51
PTCH1-212ENST00000546744 FOXK2Q01167 660 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 IHHQ14623 411 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 IAH1Q2TAA2 248 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-212ENST00000546744 LBHQ53QV2 105 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-212ENST00000546744 CST9Q5W186 159 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 VASNQ6EMK4 673 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 CSNK1A1LQ8N752 337 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 ACOT4Q8N9L9 421 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 SLC39A7Q92504 469 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 DDIT4LQ96D03 193 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 TEX37Q96LM6 180 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 UHRF2Q96PU4 802 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 SLC23A1Q9UHI7 598 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 KCNS2Q9ULS6 477 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 RNF212BA8MTL3 300 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 NPIPA2E9PIF3 369 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 NPIPA3F8WFD2 350 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 ITGB2P05107 769 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 RHOP08100 348 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 RPL17P18621 184 aaKnown RBP11.87□□□□□ -0.51
PTCH1-212ENST00000546744 PRPH2P23942 346 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 MMP11P24347 488 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 HOXA9P31269 272 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 CCL23P55773 120 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 SHC2P98077 582 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 OR5L2Q8NGL0 311 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 CDS1Q92903 461 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 TXN2Q99757 166 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 PAPOLGQ9BWT3 736 aaKnown RBP11.87□□□□□ -0.51
PTCH1-212ENST00000546744 C11orf49Q9H6J7 331 aa11.87□□□□□ -0.51
PTCH1-212ENST00000546744 ACOD1A6NK06 481 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 TK1P04183 234 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 CTRB1P17538 263 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 UBE2MP61081 183 aaKnown RBP11.86□□□□□ -0.51
PTCH1-212ENST00000546744 CTRB2Q6GPI1 263 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 OR52I2Q8NH67 350 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 MSLNLQ96KJ4 702 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 ALG12Q9BV10 488 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 TMEM59Q9BXS4 323 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 EPHX3Q9H6B9 360 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 LDAHQ9H6V9 325 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 UMAD1C9J7I0 102 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 C17orf112F2Z3M2 114 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 PTGESO14684 152 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 EDN1P05305 212 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 POU3F4P49335 361 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 ZNF765Q7L2R6 523 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 SMIM15Q7Z3B0 74 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 KLHDC1Q8N7A1 406 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 SLC22A12Q96S37 553 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 ADAM19Q9H013 955 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 ELOVL3Q9HB03 270 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 TRAV20A0A0B4J274 112 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 SERPINA7P05543 415 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 MELKQ14680 651 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 SGCAQ16586 387 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 PET117Q6UWS5 81 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 ZNF480Q8WV37 535 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 CAPNS2Q96L46 248 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 SMIM3Q9BZL3 60 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 FBRSQ9HAH7 460 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 SUSD2Q9UGT4 822 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 SERTAD3Q9UJW9 196 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 FTCDNL1E5RQL4 147 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 LGALS8O00214 317 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 SLC10A3P09131 477 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 PRR35P0CG20 571 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 CD80P33681 288 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 SLC11A1P49279 550 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 GRM7Q14831 915 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 KIR2DS3Q14952 304 aa11.86□□□□□ -0.51
PTCH1-212ENST00000546744 GLYR1Q49A26 553 aaPredicted RBP11.86□□□□□ -0.51
PTCH1-212ENST00000546744 GLDNQ6ZMI3 551 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms