RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 RGS18Q9NS28 235 aa3.2□□□□□ -1.9
SNHG1-222ENST00000545308 PAK1IP1Q9NWT1 392 aaPredicted RBP3.2□□□□□ -1.9
SNHG1-222ENST00000545308 DHRS4-AS1Q9P1J3 65 aa3.2□□□□□ -1.9
SNHG1-222ENST00000545308 SUN2Q9UH99 717 aa3.2□□□□□ -1.9
SNHG1-222ENST00000545308 IFT52Q9Y366 437 aa3.2□□□□□ -1.9
SNHG1-222ENST00000545308 DSPP15924 2871 aaKnown RBP3.2□□□□□ -1.9
SNHG1-222ENST00000545308 USP24Q9UPU5 2620 aa3.2□□□□□ -1.9
SNHG1-222ENST00000545308 PATJQ8NI35 1801 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 FAM220BPB1ANY3 271 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 E9PBE3 544 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 G3V3Y1 287 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 SLC17A2O00624 439 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 SCRG1O75711 98 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 CIB2O75838 187 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 SLC2A10O95528 541 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 IGHG4P01861 327 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 LGALS2P05162 132 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 DCNP07585 359 aaKnown RBP3.19□□□□□ -1.9
SNHG1-222ENST00000545308 CD55P08174 381 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 ZNF286BP0CG31 522 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 CT45A10P0DMU9 189 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 LAMP1P11279 417 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 POLR2EP19388 210 aaKnown RBP3.19□□□□□ -1.9
SNHG1-222ENST00000545308 IMPDH1P20839 514 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 CCR1P32246 355 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 ATP5OP48047 213 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 SLC26A2P50443 739 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 DUSP3P51452 185 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-222ENST00000545308 ATP1B3P54709 279 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 CDH4P55283 916 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 RPS14P62263 151 aaKnown RBP3.19□□□□□ -1.9
SNHG1-222ENST00000545308 MRPL28Q13084 256 aaKnown RBP3.19□□□□□ -1.9
SNHG1-222ENST00000545308 CRMP1Q14194 572 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 KCNJ11Q14654 390 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 SLC10A1Q14973 349 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 MICAQ29983 383 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 HSDL1Q3SXM5 330 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 KRT71Q3SY84 523 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 GLIPR1L2Q4G1C9 344 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 CTSL3PQ5NE16 218 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 N4BP2L1Q5TBK1 243 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-222ENST00000545308 PRAMEF5Q5TYX0 476 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 PRAMEF6Q5VXH4 476 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 LIPNQ5VXI9 398 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 MEDAGQ5VYS4 303 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 UFSP1Q6NVU6 142 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 METTL7BQ6UX53 244 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 VITQ6UXI7 678 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 BBS5Q8N3I7 341 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 ALLCQ8N6M5 410 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 NECAB1Q8N987 351 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 WDSUB1Q8N9V3 476 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 RAB3IL1Q8TBN0 382 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 FAM110BQ8TC76 370 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 SLC2A14Q8TDB8 520 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 DNAJB3Q8WWF6 145 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 RASD2Q96D21 266 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 CYP2S1Q96SQ9 504 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 COPS8Q99627 209 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 SLC39A3Q9BRY0 314 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 CHRDL1Q9BU40 450 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 TSSK1BQ9BXA7 367 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 PKIBQ9C010 78 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 OPN3Q9H1Y3 402 aaPredicted RBP3.19□□□□□ -1.9
SNHG1-222ENST00000545308 PPDPFQ9H3Y8 114 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 AZI2Q9H6S1 392 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 TIGARQ9NQ88 270 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 PXMP2Q9NR77 195 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 PNO1Q9NRX1 252 aaKnown RBP3.19□□□□□ -1.9
SNHG1-222ENST00000545308 PISDQ9UG56 409 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 RIMS3Q9UJD0 308 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 PLIN4Q96Q06 1357 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 C2orf16Q68DN1 1984 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 GCN1Q92616 2671 aaKnown RBP3.19□□□□□ -1.9
SNHG1-222ENST00000545308 IGSF9BQ9UPX0 1349 aa3.19□□□□□ -1.9
SNHG1-222ENST00000545308 ASPMQ8IZT6 3477 aa3.18□□□□□ -1.9
SNHG1-222ENST00000545308 DENND4AQ7Z401 1863 aa3.18□□□□□ -1.9
SNHG1-222ENST00000545308 DOCK5Q9H7D0 1870 aa3.18□□□□□ -1.9
SNHG1-222ENST00000545308 FLNBO75369 2602 aaKnown RBP3.18□□□□□ -1.9
SNHG1-222ENST00000545308 TRAV9-2A0A087WT02 112 aa3.18□□□□□ -1.9
SNHG1-222ENST00000545308 NDUFAF8A1L188 74 aa3.18□□□□□ -1.9
SNHG1-222ENST00000545308 RNF113AO15541 343 aaKnown RBP3.18□□□□□ -1.9
SNHG1-222ENST00000545308 RAMP3O60896 148 aa3.18□□□□□ -1.9
SNHG1-222ENST00000545308 ZNF253O75346 499 aa3.18□□□□□ -1.9
SNHG1-222ENST00000545308 PIGRP01833 764 aa3.18□□□□□ -1.9
SNHG1-222ENST00000545308 ZNF806P0C7X5 589 aa3.18□□□□□ -1.9
SNHG1-222ENST00000545308 HSMCR30P0CW71 290 aa3.18□□□□□ -1.9
SNHG1-222ENST00000545308 CD52P31358 61 aa3.18□□□□□ -1.9
SNHG1-222ENST00000545308 PI4KAP42356 2102 aa3.18□□□□□ -1.9
SNHG1-222ENST00000545308 CXCL12P48061 93 aa3.18□□□□□ -1.9
SNHG1-222ENST00000545308 STARP49675 285 aa3.18□□□□□ -1.9
SNHG1-222ENST00000545308 TPMTP51580 245 aa3.18□□□□□ -1.9
SNHG1-222ENST00000545308 MGAT3Q09327 533 aa3.18□□□□□ -1.9
SNHG1-222ENST00000545308 KLRB1Q12918 225 aa3.18□□□□□ -1.9
SNHG1-222ENST00000545308 C1orf220Q5T0J3 134 aa3.18□□□□□ -1.9
SNHG1-222ENST00000545308 METAP1DQ6UB28 335 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-222ENST00000545308 KDM7AQ6ZMT4 941 aa3.18□□□□□ -1.9
SNHG1-222ENST00000545308 ZNF497Q6ZNH5 498 aa3.18□□□□□ -1.9
SNHG1-222ENST00000545308 GPRIN3Q6ZVF9 776 aa3.18□□□□□ -1.9
SNHG1-222ENST00000545308 RUFY3Q7L099 469 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms