RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 MAGEB3O15480 346 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 GMFGO60234 142 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 FZD7O75084 574 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 HLA-DPB1P04440 258 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 PRKCAP17252 672 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 PAICSP22234 425 aaKnown RBP6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 PTBP1P26599 531 aaKnown RBP eCLIP6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 ATP6V1E1P36543 226 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 ID4P47928 161 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 SLC9A3P48764 834 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 DNASE1L1P49184 302 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 SUMO3P55854 103 aaPredicted RBP6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 CTBP2P56545 445 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 C17orf67Q0P5P2 114 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 MFAP5Q13361 173 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 SLC25A53Q5H9E4 307 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 ALG10BQ5I7T1 473 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 C1QL3Q5VWW1 255 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 WBP2NLQ6ICG8 309 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 SLC30A6Q6NXT4 461 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 ULK3Q6PHR2 472 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 LINC00696Q6ZRV3 163 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 ADGRG3Q86Y34 549 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 LYSMD2Q8IV50 215 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 GPALPP1Q8IXQ4 340 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 CADM2Q8N3J6 435 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 KLHL36Q8N4N3 616 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 PARP16Q8N5Y8 322 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 TMEM156Q8N614 296 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 CLEC1AQ8NC01 280 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 FDCSPQ8NFU4 85 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 OR8D4Q8NGM9 314 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 C1GALT1C1Q96EU7 318 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 TMEM41AQ96HV5 264 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 UBL7Q96S82 380 aaPredicted RBP6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 PTDSS2Q9BVG9 487 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 RNF32Q9H0A6 362 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 EGLN3Q9H6Z9 239 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 METTL7AQ9H8H3 244 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 ASB6Q9NWX5 421 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 PLA2G3Q9NZ20 509 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 KLRF1Q9NZS2 232 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 CNIH4Q9P003 139 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 ITGB1BP2Q9UKP3 347 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 CAB39Q9Y376 341 aaPredicted RBP6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 PCDHGB6Q9Y5F9 930 aa6.33□□□□□ -1.4
HMGCS2-204ENST00000544913 MAP1BP46821 2468 aaKnown RBP6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 NBEAQ8NFP9 2946 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 SLC22A31A6NKX4 558 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 A6NL46 340 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 LRRN3E7EW58 273 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 GTPBP1O00178 669 aaKnown RBP6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 TP53I11O14683 189 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 ZIC3O60481 467 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 HCN1O60741 890 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 IGHA1P01876 353 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 PDGFAP04085 211 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 FREM3P0C091 2139 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 RFPL3SP0C7P2 107 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 TACR3P29371 465 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 SLC6A8P48029 635 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 CYB561P49447 251 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 ETV1P50549 477 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 CCR4P51679 360 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 RRADP55042 308 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 B3GALT5-AS1P59052 145 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 LTBQ06643 244 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 POU4F2Q12837 409 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 FOXF1Q12946 379 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 DEFB109BQ30KR1 87 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 SLC22A10Q63ZE4 541 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 TIGD3Q6B0B8 471 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 SPINK14Q6IE38 97 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 CD200R1LQ6Q8B3 271 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 METAP1DQ6UB28 335 aaPredicted RBP6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 ZBTB46Q86UZ6 589 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 PLCZ1Q86YW0 608 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 LNX2Q8N448 690 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 IQCF1Q8N6M8 205 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 DNAJA4Q8WW22 397 aaPredicted RBP6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 SLC25A46Q96AG3 418 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 FAM122AQ96E09 287 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 DPH1Q9BZG8 443 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 PLA2G12AQ9BZM1 189 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 ENKD1Q9H0I2 346 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 KCNN2Q9H2S1 579 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 C12orf10Q9HB07 376 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 TXNL4BQ9NX01 149 aaKnown RBP6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 PPP4R1LQ9P1A2 415 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 TNFRSF10DQ9UBN6 386 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 CLEC2DQ9UHP7 191 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 ZNF229Q9UJW7 825 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 RABL2BQ9UNT1 228 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 SPIN1Q9Y657 262 aaPredicted RBP6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 ALPK2Q86TB3 2170 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 ATRXP46100 2492 aa6.32□□□□□ -1.4
HMGCS2-204ENST00000544913 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.31□□□□□ -1.4
HMGCS2-204ENST00000544913 K7EM74 188 aa6.31□□□□□ -1.4
HMGCS2-204ENST00000544913 GNB5O14775 395 aa6.31□□□□□ -1.4
HMGCS2-204ENST00000544913 CDC40O60508 579 aaKnown RBP eCLIP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms