RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 ARID1AO14497 2285 aa4.95□□□□□ -1.62
CLSTN3-215ENST00000544584 SLC22A23A1A5C7 686 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 CENPBD1B2RD01 187 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 ABCD4O14678 606 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 KLF4O43474 513 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 BCL10O95999 233 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 TP53P04637 393 aaPredicted RBP4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 IFNW1P05000 195 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 CSF3P09919 207 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 ADORA3P0DMS8 318 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 IMPDH2P12268 514 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 COX4I1P13073 169 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 HOXB9P17482 250 aaPredicted RBP4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 HOXB6P17509 224 aaKnown RBP4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 CDH2P19022 906 aaPredicted RBP4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 CD53P19397 219 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 KLK2P20151 261 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 IGHV1-2P23083 117 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 GRPRP30550 384 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 CCKARP32238 428 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 KDELR2P33947 212 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 ARR3P36575 388 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 CAPZA2P47755 286 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 DAP3P51398 398 aaKnown RBP4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 CDH12P55289 794 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 ATP5J2P56134 94 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 CLDN17P56750 224 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 RPS23P62266 143 aaKnown RBP4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 SELENOWP63302 87 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 BSPH1Q075Z2 132 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 DMTNQ08495 405 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 BNIP2Q12982 314 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 RAB35Q15286 201 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 MAPK11Q15759 364 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 SPATS1Q496A3 300 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 ENTPD8Q5MY95 495 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 FAM205BPQ63HN1 556 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 C16orf89Q6UX73 402 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 HACD2Q6Y1H2 254 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 NANOGNBQ7Z5D8 188 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 BIVMQ86UB2 503 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 MSRB3Q8IXL7 192 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 MICU2Q8IYU8 434 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 RNF113BQ8IZP6 322 aaKnown RBP4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 FAM169BQ8N8A8 192 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 SMYD1Q8NB12 490 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 OR52N5Q8NH56 324 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 ADAMTS16Q8TE57 1224 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 C10orf82Q8WW14 230 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 GEMIN6Q8WXD5 167 aaKnown RBP4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 MCUR1Q96AQ8 359 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 SLC41A3Q96GZ6 507 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 BOD1Q96IK1 185 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 TPD52L3Q96J77 140 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 LRRC37BQ96QE4 947 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 ARHGDIGQ99819 225 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 DHRS9Q9BPW9 319 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 KCTD14Q9BQ13 255 aaPredicted RBP4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 GSX2Q9BZM3 304 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 AMBRA1Q9C0C7 1298 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 FAM107BQ9H098 131 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 PCDHAC1Q9H158 963 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 C1orf198Q9H425 327 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 ZNF385DQ9H6B1 395 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 MRPL39Q9NYK5 338 aaKnown RBP4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 CISD1Q9NZ45 108 aaKnown RBP4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 USP22Q9UPT9 525 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 SAMD4AQ9UPU9 718 aaKnown RBP4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 LAMP3Q9UQV4 416 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 SH3GLB1Q9Y371 365 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 MED31Q9Y3C7 131 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 FKBP7Q9Y680 259 aa4.94□□□□□ -1.62
CLSTN3-215ENST00000544584 ZC3H12DA2A288 527 aaKnown RBP4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 CPSF4LA6NMK7 179 aaKnown RBP4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 ZNF99A8MXY4 864 aaPredicted RBP4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 RPL36A-HNRNPH2H7BZ11 118 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 M0R082 166 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 M0R1B8 84 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 DYNC1I1O14576 645 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 ADAM11O75078 769 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 RAB36O95755 333 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 IGHV3-9P01782 118 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 IGHG1P01857 330 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 MT-ND1P03886 318 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 OPN1SWP03999 348 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 THBDP07204 575 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 ROS1P08922 2347 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 PRG2P13727 222 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 PAX1P15863 534 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 CD40P25942 277 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 APOBEC3AP31941 199 aaPredicted RBP4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 IFNGR2P38484 337 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 CSNK1A1P48729 337 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 NUDT2P50583 147 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 FABP6P51161 128 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 ZNF84P51523 738 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 CLRN1P58418 232 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 SNRPD2P62316 118 aaKnown RBP4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 MXRA7P84157 204 aa4.93□□□□□ -1.62
CLSTN3-215ENST00000544584 HOXC5Q00444 222 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms