RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 TRAP1Q12931 704 aaKnown RBP16.87■□□□□ 0.29
DDX55-211ENST00000544429 PIWIL3Q7Z3Z3 882 aaKnown RBP16.87■□□□□ 0.29
DDX55-211ENST00000544429 CYP4Z1Q86W10 505 aa16.87■□□□□ 0.29
DDX55-211ENST00000544429 C10orf53Q8N6V4 93 aa16.87■□□□□ 0.29
DDX55-211ENST00000544429 ZNF433Q8N7K0 673 aaPredicted RBP16.87■□□□□ 0.29
DDX55-211ENST00000544429 SLC7A13Q8TCU3 470 aa16.87■□□□□ 0.29
DDX55-211ENST00000544429 C6orf203Q9P0P8 240 aaPredicted RBP16.87■□□□□ 0.29
DDX55-211ENST00000544429 NDRG3Q9UGV2 375 aa16.87■□□□□ 0.29
DDX55-211ENST00000544429 NOX1Q9Y5S8 564 aa16.87■□□□□ 0.29
DDX55-211ENST00000544429 V9GYQ6 96 aa16.87■□□□□ 0.29
DDX55-211ENST00000544429 TACC2O95359 2948 aa16.87■□□□□ 0.29
DDX55-211ENST00000544429 CSMD2Q7Z408 3487 aa16.87■□□□□ 0.29
DDX55-211ENST00000544429 PIP5K1CO60331 668 aa16.86■□□□□ 0.29
DDX55-211ENST00000544429 IGHV3-9P01782 118 aa16.86■□□□□ 0.29
DDX55-211ENST00000544429 NQO1P15559 274 aaKnown RBP16.86■□□□□ 0.29
DDX55-211ENST00000544429 ITGA2P17301 1181 aa16.86■□□□□ 0.29
DDX55-211ENST00000544429 SELENOPP49908 381 aa16.86■□□□□ 0.29
DDX55-211ENST00000544429 PRKCDQ05655 676 aa16.86■□□□□ 0.29
DDX55-211ENST00000544429 TMEM123Q8N131 208 aa16.86■□□□□ 0.29
DDX55-211ENST00000544429 POMGNT2Q8NAT1 580 aa16.86■□□□□ 0.29
DDX55-211ENST00000544429 STEAP2Q8NFT2 490 aa16.86■□□□□ 0.29
DDX55-211ENST00000544429 POP5Q969H6 163 aaKnown RBP16.86■□□□□ 0.29
DDX55-211ENST00000544429 BPIFA2Q96DR5 249 aa16.86■□□□□ 0.29
DDX55-211ENST00000544429 SGTBQ96EQ0 304 aa16.86■□□□□ 0.29
DDX55-211ENST00000544429 BOD1Q96IK1 185 aa16.86■□□□□ 0.29
DDX55-211ENST00000544429 PIP5K1AQ99755 562 aa16.86■□□□□ 0.29
DDX55-211ENST00000544429 LINC00470Q9BZP3 86 aa16.86■□□□□ 0.29
DDX55-211ENST00000544429 ACTR6Q9GZN1 396 aa16.86■□□□□ 0.29
DDX55-211ENST00000544429 SLCO5A1Q9H2Y9 848 aa16.86■□□□□ 0.29
DDX55-211ENST00000544429 MAGIXQ9H6Y5 334 aa16.86■□□□□ 0.29
DDX55-211ENST00000544429 MCCC2Q9HCC0 563 aa16.86■□□□□ 0.29
DDX55-211ENST00000544429 ASB6Q9NWX5 421 aa16.86■□□□□ 0.29
DDX55-211ENST00000544429 NOTCH2Q04721 2471 aa16.85■□□□□ 0.29
DDX55-211ENST00000544429 OR6C65A6NJZ3 312 aa16.85■□□□□ 0.29
DDX55-211ENST00000544429 A6NNC1 897 aa16.85■□□□□ 0.29
DDX55-211ENST00000544429 GSC2O15499 205 aa16.85■□□□□ 0.29
DDX55-211ENST00000544429 SIAH2O43255 324 aa16.85■□□□□ 0.29
DDX55-211ENST00000544429 CTAG2O75638 210 aa16.85■□□□□ 0.29
DDX55-211ENST00000544429 DNAJC8O75937 253 aaPredicted RBP16.85■□□□□ 0.29
DDX55-211ENST00000544429 DIRAS1O95057 198 aa16.85■□□□□ 0.29
DDX55-211ENST00000544429 H1F0P07305 194 aaKnown RBP16.85■□□□□ 0.29
DDX55-211ENST00000544429 ITGA5P08648 1049 aa16.85■□□□□ 0.29
DDX55-211ENST00000544429 ADORA3P0DMS8 318 aa16.85■□□□□ 0.29
DDX55-211ENST00000544429 FUT1P19526 365 aa16.85■□□□□ 0.29
DDX55-211ENST00000544429 MAKP20794 623 aa16.85■□□□□ 0.29
DDX55-211ENST00000544429 FOXG1P55316 489 aaPredicted RBP16.85■□□□□ 0.29
DDX55-211ENST00000544429 CLDN17P56750 224 aa16.85■□□□□ 0.29
DDX55-211ENST00000544429 RPS4XP62701 263 aaKnown RBP16.85■□□□□ 0.29
DDX55-211ENST00000544429 TLE4Q04727 773 aa16.85■□□□□ 0.29
DDX55-211ENST00000544429 FHL1Q13642 323 aa16.85■□□□□ 0.29
DDX55-211ENST00000544429 SEZ6L2Q6UXD5 910 aa16.85■□□□□ 0.29
DDX55-211ENST00000544429 MBOAT2Q6ZWT7 520 aa16.85■□□□□ 0.29
DDX55-211ENST00000544429 WDFY1Q8IWB7 410 aa16.85■□□□□ 0.29
DDX55-211ENST00000544429 UEVLDQ8IX04 471 aa16.85■□□□□ 0.29
DDX55-211ENST00000544429 NRMQ8IXM6 262 aa16.85■□□□□ 0.29
DDX55-211ENST00000544429 KISS1RQ969F8 398 aaPredicted RBP16.85■□□□□ 0.29
DDX55-211ENST00000544429 CCDC124Q96CT7 223 aaKnown RBP16.85■□□□□ 0.29
DDX55-211ENST00000544429 OR2M2Q96R28 347 aa16.85■□□□□ 0.29
DDX55-211ENST00000544429 USB1Q9BQ65 265 aaKnown RBP16.85■□□□□ 0.29
DDX55-211ENST00000544429 CADM1Q9BY67 442 aaKnown RBP16.85■□□□□ 0.29
DDX55-211ENST00000544429 TAS2R16Q9NYV7 291 aa16.85■□□□□ 0.29
DDX55-211ENST00000544429 FAM32AQ9Y421 112 aaKnown RBP16.85■□□□□ 0.29
DDX55-211ENST00000544429 ATP5HO75947 161 aa16.84■□□□□ 0.29
DDX55-211ENST00000544429 LYZL6O75951 148 aa16.84■□□□□ 0.29
DDX55-211ENST00000544429 FABP3P05413 133 aa16.84■□□□□ 0.29
DDX55-211ENST00000544429 CRYGSP22914 178 aa16.84■□□□□ 0.29
DDX55-211ENST00000544429 POU3F1Q03052 451 aaPredicted RBP16.84■□□□□ 0.29
DDX55-211ENST00000544429 FAPQ12884 760 aa16.84■□□□□ 0.29
DDX55-211ENST00000544429 C1DQ13901 141 aaKnown RBP16.84■□□□□ 0.29
DDX55-211ENST00000544429 TSC22D1Q15714 1073 aa16.84■□□□□ 0.29
DDX55-211ENST00000544429 ANKRD34AQ69YU3 496 aa16.84■□□□□ 0.29
DDX55-211ENST00000544429 NIPAL3Q6P499 406 aa16.84■□□□□ 0.29
DDX55-211ENST00000544429 PODNL1Q6PEZ8 512 aa16.84■□□□□ 0.29
DDX55-211ENST00000544429 TBPL2Q6SJ96 375 aa16.84■□□□□ 0.29
DDX55-211ENST00000544429 TMPRSS11FQ6ZWK6 438 aa16.84■□□□□ 0.29
DDX55-211ENST00000544429 LINGO2Q7L985 606 aa16.84■□□□□ 0.29
DDX55-211ENST00000544429 BHLHA15Q7RTS1 189 aaPredicted RBP16.84■□□□□ 0.29
DDX55-211ENST00000544429 ANKK1Q8NFD2 765 aa16.84■□□□□ 0.29
DDX55-211ENST00000544429 S100PBPQ96BU1 408 aa16.84■□□□□ 0.29
DDX55-211ENST00000544429 MUS81Q96NY9 551 aa16.84■□□□□ 0.29
DDX55-211ENST00000544429 MED18Q9BUE0 208 aa16.84■□□□□ 0.29
DDX55-211ENST00000544429 HIF3AQ9Y2N7 669 aa16.84■□□□□ 0.29
DDX55-211ENST00000544429 TRBV4-1A0A0J9YWV2 114 aa16.83■□□□□ 0.28
DDX55-211ENST00000544429 DEFB108AA8MXU0 73 aa16.83■□□□□ 0.28
DDX55-211ENST00000544429 RPL36A-HNRNPH2H7BZ11 118 aa16.83■□□□□ 0.28
DDX55-211ENST00000544429 IFI30P13284 250 aa16.83■□□□□ 0.28
DDX55-211ENST00000544429 LOXP28300 417 aaPredicted RBP16.83■□□□□ 0.28
DDX55-211ENST00000544429 MPGP29372 298 aa16.83■□□□□ 0.28
DDX55-211ENST00000544429 LIMS1P48059 325 aa16.83■□□□□ 0.28
DDX55-211ENST00000544429 HMGA2P52926 109 aa16.83■□□□□ 0.28
DDX55-211ENST00000544429 RPL18Q07020 188 aaKnown RBP16.83■□□□□ 0.28
DDX55-211ENST00000544429 LGALS3BPQ08380 585 aa16.83■□□□□ 0.28
DDX55-211ENST00000544429 SEC23BQ15437 767 aa16.83■□□□□ 0.28
DDX55-211ENST00000544429 ZNF730Q6ZMV8 503 aa16.83■□□□□ 0.28
DDX55-211ENST00000544429 NANOGNBQ7Z5D8 188 aa16.83■□□□□ 0.28
DDX55-211ENST00000544429 ZDHHC21Q8IVQ6 265 aa16.83■□□□□ 0.28
DDX55-211ENST00000544429 UBE2J2Q8N2K1 259 aa16.83■□□□□ 0.28
DDX55-211ENST00000544429 MCUR1Q96AQ8 359 aa16.83■□□□□ 0.28
DDX55-211ENST00000544429 TXNDC15Q96J42 360 aa16.83■□□□□ 0.28
DDX55-211ENST00000544429 LRR1Q96L50 414 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms