RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 SLC35B4Q969S0 331 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 SEC22AQ96IW7 307 aa12.15□□□□□ -0.46
TNC-212ENST00000542877 MRPS28Q9Y2Q9 187 aaKnown RBP12.15□□□□□ -0.46
TNC-212ENST00000542877 CDC14CA4D256 554 aa12.15□□□□□ -0.47
TNC-212ENST00000542877 LRIT2A6NDA9 550 aa12.15□□□□□ -0.47
TNC-212ENST00000542877 GFRA2O00451 464 aa12.15□□□□□ -0.47
TNC-212ENST00000542877 LALBAP00709 142 aa12.15□□□□□ -0.47
TNC-212ENST00000542877 FCGR2AP12318 317 aa12.15□□□□□ -0.47
TNC-212ENST00000542877 ERV3-1Q14264 604 aa12.15□□□□□ -0.47
TNC-212ENST00000542877 NR0B2Q15466 257 aa12.15□□□□□ -0.47
TNC-212ENST00000542877 LPCAT3Q6P1A2 487 aa12.15□□□□□ -0.47
TNC-212ENST00000542877 VRK3Q8IV63 474 aa12.15□□□□□ -0.47
TNC-212ENST00000542877 KLHDC9Q8NEP7 349 aa12.15□□□□□ -0.47
TNC-212ENST00000542877 RBPMSQ93062 196 aaKnown RBP12.15□□□□□ -0.47
TNC-212ENST00000542877 SLC25A46Q96AG3 418 aa12.15□□□□□ -0.47
TNC-212ENST00000542877 ARL5BQ96KC2 179 aa12.15□□□□□ -0.47
TNC-212ENST00000542877 LMAN1LQ9HAT1 526 aa12.15□□□□□ -0.47
TNC-212ENST00000542877 PRSS16Q9NQE7 514 aa12.15□□□□□ -0.47
TNC-212ENST00000542877 ZNF780AO75290 641 aaPredicted RBP12.14□□□□□ -0.47
TNC-212ENST00000542877 CA3P07451 260 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 NAGAP17050 411 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 ELK1P19419 428 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 CMIPQ8IY22 773 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 ZIC5Q96T25 663 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 SAMD10Q9BYL1 202 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 GPATCH2Q9NW75 528 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 CLEC2DQ9UHP7 191 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 GDF1P27539 372 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 EPHA4P54764 986 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 MTCP1P56278 107 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 ZP2Q05996 745 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 PLGLAQ15195 96 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 TMEM207Q6UWW9 146 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 VASH1Q7L8A9 365 aaPredicted RBP12.14□□□□□ -0.47
TNC-212ENST00000542877 C19orf47Q8N9M1 422 aaKnown RBP12.14□□□□□ -0.47
TNC-212ENST00000542877 TSSK2Q96PF2 358 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 WDR83Q9BRX9 315 aaKnown RBP12.14□□□□□ -0.47
TNC-212ENST00000542877 GABARAPL1Q9H0R8 117 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 P2RY12Q9H244 342 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 UBQLN3Q9H347 655 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 PCDHGA1Q9Y5H4 931 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 C5P01031 1676 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 H7C1C5 153 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 LCN6P62502 163 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 TEKQ02763 1124 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 TLE4Q04727 773 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 OXA1LQ15070 435 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 CADM3Q8N126 398 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 NKAIN3Q8N8D7 197 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 ZNF740Q8NDX6 193 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 ARRDC3Q96B67 414 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 I6L893 689 aaPredicted RBP12.14□□□□□ -0.47
TNC-212ENST00000542877 DDAH2O95865 285 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 CNR1P21554 472 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 MMP11P24347 488 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 IL2RGP31785 369 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 OR5M10Q6IEU7 315 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 RFLNAQ6ZTI6 216 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 LANCL3Q6ZV70 420 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 RDH10Q8IZV5 341 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 OR6M1Q8NGM8 313 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 DUSP23Q9BVJ7 150 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 WIF1Q9Y5W5 379 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 UBR2Q8IWV8 1755 aa12.14□□□□□ -0.47
TNC-212ENST00000542877 LOC100289279A0A1B0GTE1 492 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 CD14P08571 375 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 SLC35E2P0CK97 266 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 NPPBP16860 134 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 SRMP19623 302 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 DEFB103AP81534 67 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 ZNF684Q5T5D7 378 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 HIST2H3PS2Q5TEC6 136 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 RBMS3Q6XE24 437 aaKnown RBP12.13□□□□□ -0.47
TNC-212ENST00000542877 BCDIN3DQ7Z5W3 292 aaKnown RBP12.13□□□□□ -0.47
TNC-212ENST00000542877 RABEPKQ7Z6M1 372 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 NUDT22Q9BRQ3 303 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 OPN1LWP04000 364 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 OR1D4P47884 311 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 CCR6P51684 374 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 CATR1Q13166 79 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 ASAH1Q13510 395 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 MFSD12Q6NUT3 480 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 ESPNLQ6ZVH7 1005 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 OLIG1Q8TAK6 271 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 PKMYT1Q99640 499 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 LRIT1Q9P2V4 623 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 ACAD8Q9UKU7 415 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 CORINQ9Y5Q5 1042 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 MTHFD2P13995 350 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 TNFSF4P23510 183 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 ECI1P42126 302 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 ABHD17CQ6PCB6 329 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 NPSR1Q6W5P4 371 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 Q6ZTK2 550 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 SLC16A14Q7RTX9 510 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 WDR5BQ86VZ2 330 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 SCARB1Q8WTV0 552 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 CPNE4Q96A23 557 aaPredicted RBP12.13□□□□□ -0.47
TNC-212ENST00000542877 FAM3DQ96BQ1 224 aa12.13□□□□□ -0.47
TNC-212ENST00000542877 SLC6A18Q96N87 628 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms