RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 NPIPB13A6NJU9 1138 aa16.64■□□□□ 0.25
VPS33A-205ENST00000541169 NPIPB4C9JG80 1138 aa16.64■□□□□ 0.25
VPS33A-205ENST00000541169 C16orf97H3BN30 126 aa16.64■□□□□ 0.25
VPS33A-205ENST00000541169 RAMP1O60894 148 aa16.64■□□□□ 0.25
VPS33A-205ENST00000541169 TSPAN19P0C672 248 aa16.64■□□□□ 0.25
VPS33A-205ENST00000541169 SAGP10523 405 aaPredicted RBP16.64■□□□□ 0.25
VPS33A-205ENST00000541169 KLK2P20151 261 aa16.64■□□□□ 0.25
VPS33A-205ENST00000541169 AHCYP23526 432 aa16.64■□□□□ 0.25
VPS33A-205ENST00000541169 RRM2P31350 389 aa16.64■□□□□ 0.25
VPS33A-205ENST00000541169 SP5Q6BEB4 398 aaPredicted RBP16.64■□□□□ 0.25
VPS33A-205ENST00000541169 ZNF474Q6S9Z5 364 aaPredicted RBP16.64■□□□□ 0.25
VPS33A-205ENST00000541169 CASP12Q6UXS9 341 aa16.64■□□□□ 0.25
VPS33A-205ENST00000541169 SLC46A3Q7Z3Q1 461 aa16.64■□□□□ 0.25
VPS33A-205ENST00000541169 OAFQ86UD1 273 aa16.64■□□□□ 0.25
VPS33A-205ENST00000541169 ZIC4Q8N9L1 334 aa16.64■□□□□ 0.25
VPS33A-205ENST00000541169 PAPD5Q8NDF8 572 aaKnown RBP16.64■□□□□ 0.25
VPS33A-205ENST00000541169 OR4K5Q8NGD3 323 aa16.64■□□□□ 0.25
VPS33A-205ENST00000541169 CANT1Q8WVQ1 401 aa16.64■□□□□ 0.25
VPS33A-205ENST00000541169 RSRC1Q96IZ7 334 aaKnown RBP16.64■□□□□ 0.25
VPS33A-205ENST00000541169 ALPK1Q96QP1 1244 aa16.64■□□□□ 0.25
VPS33A-205ENST00000541169 FUZQ9BT04 418 aa16.64■□□□□ 0.25
VPS33A-205ENST00000541169 CHID1Q9BWS9 393 aa16.64■□□□□ 0.25
VPS33A-205ENST00000541169 REEP1Q9H902 201 aa16.64■□□□□ 0.25
VPS33A-205ENST00000541169 C20orf141Q9NUB4 165 aa16.64■□□□□ 0.25
VPS33A-205ENST00000541169 CCM2LQ9NUG4 571 aaPredicted RBP16.64■□□□□ 0.25
VPS33A-205ENST00000541169 MALT1Q9UDY8 824 aa16.64■□□□□ 0.25
VPS33A-205ENST00000541169 HIF3AQ9Y2N7 669 aa16.64■□□□□ 0.25
VPS33A-205ENST00000541169 DOPEY2Q9Y3R5 2298 aa16.63■□□□□ 0.25
VPS33A-205ENST00000541169 A0A1W2PRG6 482 aa16.63■□□□□ 0.25
VPS33A-205ENST00000541169 EFCAB9A8MZ26 197 aa16.63■□□□□ 0.25
VPS33A-205ENST00000541169 RNF13O43567 381 aa16.63■□□□□ 0.25
VPS33A-205ENST00000541169 DIRAS1O95057 198 aa16.63■□□□□ 0.25
VPS33A-205ENST00000541169 GOSR1O95249 250 aa16.63■□□□□ 0.25
VPS33A-205ENST00000541169 COX6B1P14854 86 aa16.63■□□□□ 0.25
VPS33A-205ENST00000541169 PSMB1P20618 241 aaKnown RBP16.63■□□□□ 0.25
VPS33A-205ENST00000541169 CBLP22681 906 aa16.63■□□□□ 0.25
VPS33A-205ENST00000541169 TGFBR3Q03167 851 aa16.63■□□□□ 0.25
VPS33A-205ENST00000541169 ITGADQ13349 1161 aa16.63■□□□□ 0.25
VPS33A-205ENST00000541169 EPHX4Q8IUS5 362 aa16.63■□□□□ 0.25
VPS33A-205ENST00000541169 DMRTC2Q8IXT2 367 aaPredicted RBP16.63■□□□□ 0.25
VPS33A-205ENST00000541169 STEAP2Q8NFT2 490 aa16.63■□□□□ 0.25
VPS33A-205ENST00000541169 OR52J3Q8NH60 311 aa16.63■□□□□ 0.25
VPS33A-205ENST00000541169 LRR1Q96L50 414 aa16.63■□□□□ 0.25
VPS33A-205ENST00000541169 LINC00470Q9BZP3 86 aa16.63■□□□□ 0.25
VPS33A-205ENST00000541169 SLCO5A1Q9H2Y9 848 aa16.63■□□□□ 0.25
VPS33A-205ENST00000541169 NPDC1Q9NQX5 325 aaPredicted RBP16.63■□□□□ 0.25
VPS33A-205ENST00000541169 ASB6Q9NWX5 421 aa16.63■□□□□ 0.25
VPS33A-205ENST00000541169 TAS2R5Q9NYW4 299 aa16.63■□□□□ 0.25
VPS33A-205ENST00000541169 UPB1Q9UBR1 384 aa16.63■□□□□ 0.25
VPS33A-205ENST00000541169 BAHCC1Q9P281 2608 aa16.62■□□□□ 0.25
VPS33A-205ENST00000541169 TUBAL3A6NHL2 446 aa16.62■□□□□ 0.25
VPS33A-205ENST00000541169 CENPBD1B2RD01 187 aa16.62■□□□□ 0.25
VPS33A-205ENST00000541169 BLOC1S5-TXNDC5H3BN57 136 aa16.62■□□□□ 0.25
VPS33A-205ENST00000541169 TNFRSF11BO00300 401 aa16.62■□□□□ 0.25
VPS33A-205ENST00000541169 SLC43A1O75387 559 aa16.62■□□□□ 0.25
VPS33A-205ENST00000541169 CST1P01037 141 aa16.62■□□□□ 0.25
VPS33A-205ENST00000541169 UGT2B10P36537 528 aa16.62■□□□□ 0.25
VPS33A-205ENST00000541169 DAP3P51398 398 aaKnown RBP16.62■□□□□ 0.25
VPS33A-205ENST00000541169 RPS4XP62701 263 aaKnown RBP16.62■□□□□ 0.25
VPS33A-205ENST00000541169 POU3F1Q03052 451 aaPredicted RBP16.62■□□□□ 0.25
VPS33A-205ENST00000541169 GABRG1Q8N1C3 465 aa16.62■□□□□ 0.25
VPS33A-205ENST00000541169 UBE2J2Q8N2K1 259 aa16.62■□□□□ 0.25
VPS33A-205ENST00000541169 DUS3LQ96G46 650 aaKnown RBP16.62■□□□□ 0.25
VPS33A-205ENST00000541169 ZNF385AQ96PM9 386 aaKnown RBP16.62■□□□□ 0.25
VPS33A-205ENST00000541169 KCNN3Q9UGI6 736 aa16.62■□□□□ 0.25
VPS33A-205ENST00000541169 LYVE1Q9Y5Y7 322 aa16.62■□□□□ 0.25
VPS33A-205ENST00000541169 TRBV4-1A0A0J9YWV2 114 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 ZNF726A6NNF4 738 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 LRRN3E7EW58 273 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 GNGT2O14610 69 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 HNRNPRO43390 633 aaKnown RBP16.61■□□□□ 0.25
VPS33A-205ENST00000541169 TRAF3IP2O43734 574 aaPredicted RBP16.61■□□□□ 0.25
VPS33A-205ENST00000541169 KRT33AO76009 404 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 FCGR1AP12314 374 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 NR2C1P13056 603 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 PTNP21246 168 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 PAX7P23759 505 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 KIR2DL3P43628 341 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 LIMS1P48059 325 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 ARHGDIAP52565 204 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 CLDN17P56750 224 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 RPL18Q07020 188 aaKnown RBP16.61■□□□□ 0.25
VPS33A-205ENST00000541169 FOXD4Q12950 439 aaPredicted RBP16.61■□□□□ 0.25
VPS33A-205ENST00000541169 ZBED5Q49AG3 693 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 SFRP5Q5T4F7 317 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 FAM205BPQ63HN1 556 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 OR7E24Q6IFN5 339 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 TBPL2Q6SJ96 375 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 MEX3BQ6ZN04 569 aaKnown RBP16.61■□□□□ 0.25
VPS33A-205ENST00000541169 P2RY8Q86VZ1 359 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 LRRC17Q8N6Y2 441 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 OR6X1Q8NH79 312 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 FAM222BQ8WU58 562 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 ZNF775Q96BV0 537 aaPredicted RBP16.61■□□□□ 0.25
VPS33A-205ENST00000541169 DACH2Q96NX9 599 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 B3GAT2Q9NPZ5 323 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 INIPQ9NRY2 104 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 TAS2R16Q9NYV7 291 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 SEC14L4Q9UDX3 406 aa16.61■□□□□ 0.25
VPS33A-205ENST00000541169 SPTAN1Q13813 2472 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms