RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 CD38P28907 300 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 GDNFP39905 211 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 NR0B1P51843 470 aaKnown RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 MESP2Q0VG99 397 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 KLF9Q13886 244 aaPredicted RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 ERV3-1Q14264 604 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 TRAM2Q15035 370 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 GUCA2BQ16661 112 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 SLC25A35Q3KQZ1 300 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 ACER2Q5QJU3 275 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 FAM69AQ5T7M9 428 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 FAM27D1Q5T7N8 215 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 CARD17Q5XLA6 110 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 FIGLAQ6QHK4 219 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 NHLRC1Q6VVB1 395 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 Q6ZTK2 550 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 HSD11B1LQ7Z5J1 315 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 HSD17B13Q7Z5P4 300 aaPredicted RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 CEACAM19Q7Z692 300 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 PRR22Q8IZ63 422 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 ACBD7Q8N6N7 88 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 SIRT6Q8N6T7 355 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 FAM71CQ8NEG0 241 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 OR2AJ1Q8NGZ0 328 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 OR4Q3Q8NH05 313 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 OR51Q1Q8NH59 317 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 ZNF480Q8WV37 535 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 OSTF1Q92882 214 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 ZNF775Q96BV0 537 aaPredicted RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 MRPS24Q96EL2 167 aaKnown RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 WDR34Q96EX3 536 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 LCORQ96JN0 433 aaPredicted RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 C14orf105Q9NVL8 296 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 CALML5Q9NZT1 146 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 C19orf25Q9UFG5 118 aaPredicted RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 ING1Q9UK53 422 aaPredicted RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 DKKL1Q9UK85 242 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 SH2B3Q9UQQ2 575 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 CHST2Q9Y4C5 530 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 WNK1Q9H4A3 2382 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 A0A0G2JK05 382 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 A0A1B0GUH1 482 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 A0A1W2PPE3 182 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 PLSCR5A0PG75 271 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 CDC14CA4D256 554 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 SELENOFO60613 162 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 EIF1BO60739 113 aaKnown RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 ITGA10O75578 1167 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 APBB3O95704 486 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 ECDO95905 644 aaPredicted RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 CYB5AP00167 134 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 IFNA6P05013 189 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 CSN2P05814 226 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 NFYAP23511 347 aaPredicted RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 EIF1P41567 113 aaKnown RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 AKR1C3P42330 323 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 OR1D4P47884 311 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 VEGFCP49767 419 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 OR12D2P58182 307 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 PSMA6P60900 246 aaKnown RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 RAP2BP61225 183 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 SCRN3Q0VDG4 424 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 GAB4Q2WGN9 574 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 SFRP4Q6FHJ7 346 aaPredicted RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 ELP2Q6IA86 826 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 PARS2Q7L3T8 475 aaKnown RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 OLIG3Q7RTU3 272 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 GID4Q8IVV7 300 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 MEIOBQ8N635 442 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 LILRA3Q8N6C8 439 aaPredicted RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 ZNF676Q8N7Q3 588 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 OR2L5Q8NG80 312 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 OR5D16Q8NGK9 328 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 OR5W2Q8NH69 310 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 THEM6Q8WUY1 208 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 ZFPM2Q8WW38 1151 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 EDAQ92838 391 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 LRIG1Q96JA1 1093 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 CAMK1GQ96NX5 476 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 OR10A4Q9H209 315 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 CHMP1AQ9HD42 196 aaPredicted RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 SIRT3Q9NTG7 399 aaPredicted RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 TEX10Q9NXF1 929 aaPredicted RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 LRIT1Q9P2V4 623 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 CAMK2AQ9UQM7 478 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 SIRT4Q9Y6E7 314 aaPredicted RBP4.82□□□□□ -1.64
PROM1-220ENST00000540805 PLXND1Q9Y4D7 1925 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 ESPL1Q14674 2120 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 WNK2Q9Y3S1 2297 aa4.82□□□□□ -1.64
PROM1-220ENST00000540805 TCF20Q9UGU0 1960 aaKnown RBP4.81□□□□□ -1.64
PROM1-220ENST00000540805 PTPN13Q12923 2485 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 MDC1Q14676 2089 aaKnown RBP4.81□□□□□ -1.64
PROM1-220ENST00000540805 CXorf51AA0A1B0GTR3 108 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 A0A1B0GW55 424 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 DAPL1A0PJW8 107 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 OR6C65A6NJZ3 312 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 NPC1O15118 1278 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 ARPC1BO15143 372 aaKnown RBP4.81□□□□□ -1.64
PROM1-220ENST00000540805 YKT6O15498 198 aa4.81□□□□□ -1.64
PROM1-220ENST00000540805 GSTZ1O43708 216 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms