RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783		A0A0G2JK05	382 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783		A0A1B0GVI7	797 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ANXA2P2	A6NMY6	339 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783		H0YIG0	161 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	BET1	O15155	118 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FCMR	O60667	390 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	STK17B	O94768	372 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ITGA3	P26006	1051 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GDNF	P39905	211 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RPL35	P42766	123 aa	Known RBP	5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OMP	P47874	163 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CLDN12	P56749	244 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FUT5	Q11128	374 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SQSTM1	Q13501	440 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PGGHG	Q32M88	737 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CDC73	Q6P1J9	531 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	BTN2A1	Q7KYR7	527 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	LSM14A	Q8ND56	463 aa	Known RBP	5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR51L1	Q8NGJ5	315 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR52B4	Q8NGK2	314 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	C4orf36	Q96KX1	117 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TIMP4	Q99727	224 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SARG	Q9BW04	601 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TWSG1	Q9GZX9	223 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SHARPIN	Q9H0F6	387 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SDHAF3	Q9NRP4	125 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PNO1	Q9NRX1	252 aa	Known RBP	5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	KLK11	Q9UBX7	282 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SLC22A7	Q9Y694	548 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	KNL1	Q8NG31	2342 aa		5.2	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PLXND1	Q9Y4D7	1925 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NSG1	A0A0A6YYJ2	146 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MFSD2B	A6NFX1	497 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PDCD5	O14737	125 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CASC3	O15234	703 aa	Known RBP	5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZNF749	O43361	778 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CBX7	O95931	251 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NMB	P08949	121 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ST6GAL1	P15907	406 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CFL1	P23528	166 aa	Known RBP	5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CD1C	P29017	333 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	HTR1F	P30939	366 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	BSG	P35613	385 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DLST	P36957	453 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GFER	P55789	205 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DEFA5	Q01523	94 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	EXT1	Q16394	746 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NHLRC3	Q5JS37	347 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NDUFAF5	Q5TEU4	345 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	IKBIP	Q70UQ0	350 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	D2HGDH	Q8N465	521 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RFLNB	Q8N5W9	214 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RELL2	Q8NC24	303 aa	Predicted RBP	5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR11G2	Q8NGC1	345 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR5J2	Q8NH18	312 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR52N1	Q8NH53	320 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SPATA5L1	Q9BVQ7	753 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DPH1	Q9BZG8	443 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SEMA4C	Q9C0C4	833 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RXFP3	Q9NSD7	469 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CALML5	Q9NZT1	146 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DNAH14	Q0VDD8	3507 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FXYD6-FXYD2	A0A087WZ82	144 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CDC14C	A4D256	554 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DUXA	A6NLW8	204 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	LRRN3	E7EW58	273 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783		H3BSH0	61 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SMAD9	O15198	467 aa	Known RBP	5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PEX14	O75381	377 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NSA2	O95478	260 aa	Known RBP	5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	IGHA1	P01876	353 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	THY1	P04216	161 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CELA2B	P08218	269 aa	Predicted RBP	5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	LIPC	P11150	499 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RAB3B	P20337	219 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZP3	P21754	424 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NOS3	P29474	1203 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	PSMA6	P60900	246 aa	Known RBP	5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DUSP2	Q05923	314 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TRAM2	Q15035	370 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NSDHL	Q15738	373 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	TP53I3	Q53FA7	332 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	HES5	Q5TA89	166 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR4C11	Q6IEV9	310 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	RGS7BP	Q6MZT1	257 aa	Predicted RBP	5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZNF613	Q6PF04	617 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	ZNF433	Q8N7K0	673 aa	Predicted RBP	5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR56B4	Q8NH76	319 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GHSR	Q92847	366 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	MOAP1	Q96BY2	351 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	DERL3	Q96Q80	235 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	OR1F2P	Q96R84	312 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	CHRNA10	Q9GZZ6	450 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	FXYD6	Q9H0Q3	95 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	UBQLN3	Q9H347	655 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NEUROD4	Q9HD90	331 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	NTM	Q9P121	344 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	GPR160	Q9UJ42	338 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	SESN1	Q9Y6P5	492 aa		5.19	□□□□□ -1.58
RAPGEF4-215	ENST00000540783	IGHV5-10-1	A0A0J9YXX1	117 aa		5.19	□□□□□ -1.58

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