RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 ING3Q9NXR8 418 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 SPAG17Q6Q759 2223 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 TRAV1-2A0A0B4J238 106 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 LMO7DNF2Z398 122 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 H3BMH7 237 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 ICOSLGO75144 302 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 PPM1BO75688 479 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 SERPINA3P01011 423 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 SLC37A1P57057 533 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 NXPH1P58417 271 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 GALK2Q01415 458 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 ALG10Q5BKT4 473 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 LAMTOR1Q6IAA8 161 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 OGFOD3Q6PK18 319 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 ATG4DQ86TL0 474 aaPredicted RBP10.48□□□□□ -0.73
C11orf54-214ENST00000540113 TIGD4Q8IY51 512 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 OR11H7Q8NGC8 314 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 C1orf216Q8TAB5 229 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 DEDD2Q8WXF8 326 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 DACT3Q96B18 629 aaPredicted RBP10.48□□□□□ -0.73
C11orf54-214ENST00000540113 ADAD1Q96M93 576 aaKnown RBP10.48□□□□□ -0.73
C11orf54-214ENST00000540113 NKX3-1Q99801 234 aaPredicted RBP10.48□□□□□ -0.73
C11orf54-214ENST00000540113 PDE7BQ9NP56 450 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 RXFP3Q9NSD7 469 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 NKIRAS2Q9NYR9 191 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 ZNF222Q9UK12 451 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 NPFFR2Q9Y5X5 522 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 RNF215Q9Y6U7 377 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 CFAP54Q96N23 3096 aa10.48□□□□□ -0.73
C11orf54-214ENST00000540113 C11orf98E9PRG8 122 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 SCDO00767 359 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 FABP7O15540 132 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 SCO2O43819 266 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 ARL6IP5O75915 188 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 GLCEO94923 617 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 PLGP00747 810 aaPredicted RBP10.47□□□□□ -0.73
C11orf54-214ENST00000540113 TCRBP04435 133 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 TACR3P29371 465 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 PSMD4P55036 377 aaKnown RBP10.47□□□□□ -0.73
C11orf54-214ENST00000540113 RPS15P62841 145 aaKnown RBP10.47□□□□□ -0.73
C11orf54-214ENST00000540113 RPL6Q02878 288 aaKnown RBP10.47□□□□□ -0.73
C11orf54-214ENST00000540113 RPL18Q07020 188 aaKnown RBP10.47□□□□□ -0.73
C11orf54-214ENST00000540113 MRPL28Q13084 256 aaKnown RBP10.47□□□□□ -0.73
C11orf54-214ENST00000540113 C14orf28Q4W4Y0 310 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 VWA2Q5GFL6 755 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 FNDC7Q5VTL7 733 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 SFRP4Q6FHJ7 346 aaPredicted RBP10.47□□□□□ -0.73
C11orf54-214ENST00000540113 WBP2NLQ6ICG8 309 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 PTCRAQ6ISU1 281 aaPredicted RBP10.47□□□□□ -0.73
C11orf54-214ENST00000540113 LYPD8Q6UX82 237 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 SHISA6Q6ZSJ9 500 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 FCRLAQ7L513 359 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 LINGO2Q7L985 606 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 MARCH3Q86UD3 253 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 TEX19Q8NA77 164 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 OR8K3Q8NH51 312 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 ZFAND1Q8TCF1 268 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 PIGKQ92643 395 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 LPAR4Q99677 370 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 ULBP3Q9BZM4 244 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 WDR76Q9H967 626 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 MMP25Q9NPA2 562 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 UBQLN4Q9NRR5 601 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 TEKT2Q9UIF3 430 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 HSPB11Q9Y547 144 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 ARID1BQ8NFD5 2236 aaPredicted RBP10.47□□□□□ -0.73
C11orf54-214ENST00000540113 TMEM150CB9EJG8 249 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 H0YIG0 161 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 ARPC3O15145 178 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 C1QBP02746 253 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 CXCL3P19876 107 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 OR1D5P58170 312 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 CFHR1Q03591 330 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 MAB21L1Q13394 359 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.47□□□□□ -0.73
C11orf54-214ENST00000540113 TMEM255AQ5JRV8 349 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 TCTE1Q5JU00 501 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 C1orf189Q5VU69 101 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 LRRC69Q6ZNQ3 347 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 FAM122BQ7Z309 247 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 SLITRK4Q8IW52 837 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 CMIPQ8IY22 773 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 LRRC75AQ8NAA5 344 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 OR10AC1Q8NH08 325 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 TAAR8Q969N4 342 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 ZNF578Q96N58 590 aaPredicted RBP10.47□□□□□ -0.73
C11orf54-214ENST00000540113 TSPAN32Q96QS1 320 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 CACNG6Q9BXT2 260 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 NDEL1Q9GZM8 345 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 MED28Q9H204 178 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 SLA2Q9H6Q3 261 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 FLVCR2Q9UPI3 526 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 WDR87Q6ZQQ6 2873 aa10.47□□□□□ -0.73
C11orf54-214ENST00000540113 ZNF879B4DU55 563 aa10.46□□□□□ -0.73
C11orf54-214ENST00000540113 ZNF264O43296 627 aa10.46□□□□□ -0.73
C11orf54-214ENST00000540113 RAD1O60671 282 aa10.46□□□□□ -0.73
C11orf54-214ENST00000540113 ZNF780AO75290 641 aaPredicted RBP10.46□□□□□ -0.73
C11orf54-214ENST00000540113 UBL3O95164 117 aa10.46□□□□□ -0.73
C11orf54-214ENST00000540113 NUDT14O95848 222 aa10.46□□□□□ -0.73
C11orf54-214ENST00000540113 ITPKBP27987 946 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms