RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 NETO1Q8TDF5 533 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 PYCR2Q96C36 320 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 SEC22AQ96IW7 307 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 OR51M1Q9H341 326 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 PELI2Q9HAT8 420 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 KCMF1Q9P0J7 381 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 VPS29Q9UBQ0 182 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 ABCD4O14678 606 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 STAG3L2P0CL84 134 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 ZFP36L2P47974 494 aaKnown RBP5.62□□□□□ -1.51
PTPRD-214ENST00000540109 ZNF273Q14593 569 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 ACOT6Q3I5F7 207 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-214ENST00000540109 PAGE3Q5JUK9 113 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 TMEM108Q6UXF1 575 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 CCDC190Q86UF4 302 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 EIF4E3Q8N5X7 224 aaKnown RBP5.62□□□□□ -1.51
PTPRD-214ENST00000540109 DUSP18Q8NEJ0 188 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 OR2L8Q8NGY9 312 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 SUSD6Q92537 303 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 GCDHQ92947 438 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-214ENST00000540109 SLC35G5Q96KT7 338 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 GPER1Q99527 375 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 EQTNQ9NQ60 294 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 PLEKHM1Q9Y4G2 1056 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 PCDHGA5Q9Y5G8 931 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 ZNF780BQ9Y6R6 833 aa5.62□□□□□ -1.51
PTPRD-214ENST00000540109 FAM166BA8MTA8 275 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 ELK1P19419 428 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 MAKP20794 623 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 UQCRC2P22695 453 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 ACAA2P42765 397 aaKnown RBP5.61□□□□□ -1.51
PTPRD-214ENST00000540109 KIR2DL3P43628 341 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 ZNF41P51814 821 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-214ENST00000540109 RAP1AP62834 184 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 ZXDBP98169 803 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 MICAQ29983 383 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 FNDC3BQ53EP0 1204 aaKnown RBP5.61□□□□□ -1.51
PTPRD-214ENST00000540109 ARSIQ5FYB1 569 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 SOHLH1Q5JUK2 328 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 TMEM71Q6P5X7 295 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 TSSK4Q6SA08 328 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 THOC6Q86W42 341 aaKnown RBP5.61□□□□□ -1.51
PTPRD-214ENST00000540109 TGIF2LXQ8IUE1 241 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 MFSD4AQ8N468 514 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 CLDN19Q8N6F1 224 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 STEAP2Q8NFT2 490 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 VN1R2Q8NFZ6 395 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 APH1BQ8WW43 257 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 OR5P2Q8WZ92 322 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 CD180Q99467 661 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 PITX2Q99697 317 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 IL21RQ9HBE5 538 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 ZDHHC4Q9NPG8 344 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 TEX13DA0A0J9YY54 714 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-214ENST00000540109 LINC01553A4QN01 128 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 ANKRD61A6NGH8 418 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 HRO43593 1189 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 SLC16A8O95907 504 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 ACRP10323 421 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 CXCR1P25024 350 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 PRDX3P30048 256 aaKnown RBP5.61□□□□□ -1.51
PTPRD-214ENST00000540109 CTSOP43234 321 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-214ENST00000540109 SOX2P48431 317 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 CTBSQ01459 385 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 ZNF266Q14584 549 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 RAB30Q15771 203 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 RIPPLY2Q5TAB7 128 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 CST9LP1Q5W188 147 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 OR2T2Q6IF00 324 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 ZC3H14Q6PJT7 736 aaKnown RBP5.61□□□□□ -1.51
PTPRD-214ENST00000540109 AGTRAPQ6RW13 159 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 YAF2Q8IY57 180 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 ZNF709Q8N972 641 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 OR6K6Q8NGW6 343 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 HGDQ93099 445 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 LRR1Q96L50 414 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 DPH2Q9BQC3 489 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-214ENST00000540109 NIPSNAP3BQ9BS92 247 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 POLDIP3Q9BY77 421 aaKnown RBP5.61□□□□□ -1.51
PTPRD-214ENST00000540109 CTSFQ9UBX1 484 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 TRBV5-3A0A0A0MS03 114 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 SLC22A23A1A5C7 686 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 PPP6CO00743 305 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 SIGLEC5O15389 551 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 SLC31A2O15432 143 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 TLX3O43711 291 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-214ENST00000540109 TBX19O60806 448 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 RBMXL2O75526 392 aaKnown RBP5.61□□□□□ -1.51
PTPRD-214ENST00000540109 ERAL1O75616 437 aaKnown RBP5.61□□□□□ -1.51
PTPRD-214ENST00000540109 EIF3GO75821 320 aaKnown RBP eCLIP5.61□□□□□ -1.51
PTPRD-214ENST00000540109 CBR3O75828 277 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 JTBO76095 146 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 PMP2P02689 132 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 GBAP04062 536 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 AMY2AP04746 511 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 CRYBA1P05813 215 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 HTR1AP08908 422 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 DAOP14920 347 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 ACHEP22303 614 aa5.61□□□□□ -1.51
PTPRD-214ENST00000540109 HTR6P50406 440 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms