RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 TUSC5Q8IXB3 177 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 ZNF555Q8NEP9 628 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 LIPHQ8WWY8 451 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 ZNF775Q96BV0 537 aaPredicted RBP11.55□□□□□ -0.56
CCDC42-202ENST00000539522 SLC25A36Q96CQ1 311 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 UCK2Q9BZX2 261 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 BCO1Q9HAY6 547 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 KRT84Q9NSB2 600 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 PAQR5Q9NXK6 330 aaPredicted RBP11.55□□□□□ -0.56
CCDC42-202ENST00000539522 TAS2R5Q9NYW4 299 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 JKAMPQ9P055 326 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 KIF17Q9P2E2 1029 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 ENOPH1Q9UHY7 261 aa11.55□□□□□ -0.56
CCDC42-202ENST00000539522 PLPP3O14495 311 aa11.54□□□□□ -0.56
CCDC42-202ENST00000539522 OR10H3O60404 316 aa11.54□□□□□ -0.56
CCDC42-202ENST00000539522 OR7A10O76100 309 aa11.54□□□□□ -0.56
CCDC42-202ENST00000539522 TMIGD3P0DMS9 266 aaPredicted RBP11.54□□□□□ -0.56
CCDC42-202ENST00000539522 CAPGP40121 348 aa11.54□□□□□ -0.56
CCDC42-202ENST00000539522 ADARB1P78563 741 aaKnown RBP11.54□□□□□ -0.56
CCDC42-202ENST00000539522 ZIK1Q3SY52 487 aaPredicted RBP11.54□□□□□ -0.56
CCDC42-202ENST00000539522 SLC36A3Q495N2 470 aa11.54□□□□□ -0.56
CCDC42-202ENST00000539522 PDSS1Q5T2R2 415 aa11.54□□□□□ -0.56
CCDC42-202ENST00000539522 TMEM211Q6ICI0 200 aa11.54□□□□□ -0.56
CCDC42-202ENST00000539522 C5orf46Q6UWT4 87 aa11.54□□□□□ -0.56
CCDC42-202ENST00000539522 ZNF730Q6ZMV8 503 aa11.54□□□□□ -0.56
CCDC42-202ENST00000539522 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.54□□□□□ -0.56
CCDC42-202ENST00000539522 LRRC75AQ8NAA5 344 aa11.54□□□□□ -0.56
CCDC42-202ENST00000539522 OR4K5Q8NGD3 323 aa11.54□□□□□ -0.56
CCDC42-202ENST00000539522 GNPDA2Q8TDQ7 276 aa11.54□□□□□ -0.56
CCDC42-202ENST00000539522 RND1Q92730 232 aa11.54□□□□□ -0.56
CCDC42-202ENST00000539522 ZNF385AQ96PM9 386 aaKnown RBP11.54□□□□□ -0.56
CCDC42-202ENST00000539522 TM9SF2Q99805 663 aa11.54□□□□□ -0.56
CCDC42-202ENST00000539522 ADI1Q9BV57 179 aa11.54□□□□□ -0.56
CCDC42-202ENST00000539522 DGCR6LQ9BY27 220 aa11.54□□□□□ -0.56
CCDC42-202ENST00000539522 ENKD1Q9H0I2 346 aa11.54□□□□□ -0.56
CCDC42-202ENST00000539522 TOR3AQ9H497 397 aa11.54□□□□□ -0.56
CCDC42-202ENST00000539522 CHST11Q9NPF2 352 aa11.54□□□□□ -0.56
CCDC42-202ENST00000539522 FANCFQ9NPI8 374 aa11.54□□□□□ -0.56
CCDC42-202ENST00000539522 PAPOLBQ9NRJ5 636 aaKnown RBP11.54□□□□□ -0.56
CCDC42-202ENST00000539522 FAM118AQ9NWS6 357 aa11.54□□□□□ -0.56
CCDC42-202ENST00000539522 MRPL39Q9NYK5 338 aaKnown RBP11.54□□□□□ -0.56
CCDC42-202ENST00000539522 MCTS1Q9ULC4 181 aaKnown RBP11.54□□□□□ -0.56
CCDC42-202ENST00000539522 POFUT2Q9Y2G5 429 aa11.54□□□□□ -0.56
CCDC42-202ENST00000539522 FLVCR1Q9Y5Y0 555 aa11.54□□□□□ -0.56
CCDC42-202ENST00000539522 LRRK2Q5S007 2527 aa11.54□□□□□ -0.56
CCDC42-202ENST00000539522 C19orf84I3L1E1 186 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 SLC16A6O15403 523 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 TRAF3IP2O43734 574 aaPredicted RBP11.53□□□□□ -0.56
CCDC42-202ENST00000539522 OR2T1O43869 369 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 SYNGR4O95473 234 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 CLDN1O95832 211 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 ADAP00813 363 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 IFI30P13284 250 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 GSTM3P21266 225 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 CTSSP25774 331 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 GRNP28799 593 aaKnown RBP11.53□□□□□ -0.56
CCDC42-202ENST00000539522 UQCRC1P31930 480 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 GPR4P46093 362 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 RPS6KA3P51812 740 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 RPS4XP62701 263 aaKnown RBP11.53□□□□□ -0.56
CCDC42-202ENST00000539522 SIRPAP78324 504 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 IL1RL1Q01638 556 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 RASGEF1BQ0VAM2 473 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 PDK3Q15120 406 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 C1orf94Q6P1W5 598 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 PGBD2Q6P3X8 592 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 CD300LDQ6UXZ3 194 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 TMPRSS11FQ6ZWK6 438 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 CHMP1BQ7LBR1 199 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 P4HA3Q7Z4N8 544 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 MRGPRGQ86SM5 289 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 CDK20Q8IZL9 346 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 FAM26EQ8N5C1 309 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 AQP11Q8NBQ7 271 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 ADPRHL1Q8NDY3 354 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 OR9Q2Q8NGE9 314 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 MOSPD2Q8NHP6 518 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 CYGBQ8WWM9 190 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 BPIFA2Q96DR5 249 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 SGTBQ96EQ0 304 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 GMPPAQ96IJ6 420 aaPredicted RBP11.53□□□□□ -0.56
CCDC42-202ENST00000539522 FAM46AQ96IP4 442 aaKnown RBP11.53□□□□□ -0.56
CCDC42-202ENST00000539522 NR1H4Q96RI1 486 aaPredicted RBP11.53□□□□□ -0.56
CCDC42-202ENST00000539522 FKRPQ9H9S5 495 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 KRCC1Q9NPI7 259 aaPredicted RBP11.53□□□□□ -0.56
CCDC42-202ENST00000539522 TIGARQ9NQ88 270 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 ZNF229Q9UJW7 825 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 MED31Q9Y3C7 131 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 CACNA1CQ13936 2221 aa11.53□□□□□ -0.56
CCDC42-202ENST00000539522 LOC100130705A0A1B0GUX0 176 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 LOC102725191A0A1B0GVB3 256 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 HTR3EA5X5Y0 456 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 NKX2-6A6NCS4 301 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 HSPB2A8KAH6 182 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 ZNF724A8MTY0 619 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 EIF1BO60739 113 aaKnown RBP11.52□□□□□ -0.57
CCDC42-202ENST00000539522 MITFO75030 526 aaPredicted RBP11.52□□□□□ -0.57
CCDC42-202ENST00000539522 PTP4A3O75365 173 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 MT-ATP6P00846 226 aa11.52□□□□□ -0.57
CCDC42-202ENST00000539522 IL2RAP01589 272 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms