RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 NELFAQ9H3P2 528 aa12.05□□□□□ -0.48
CD9-208ENST00000538834 SELENONQ9NZV5 590 aa12.05□□□□□ -0.48
CD9-208ENST00000538834 ST6GALNAC2Q9UJ37 374 aa12.05□□□□□ -0.48
CD9-208ENST00000538834 ZNF229Q9UJW7 825 aa12.05□□□□□ -0.48
CD9-208ENST00000538834 SLC25A15Q9Y619 301 aa12.05□□□□□ -0.48
CD9-208ENST00000538834 SERPINA1P01009 418 aa12.04□□□□□ -0.48
CD9-208ENST00000538834 IGHV3-9P01782 118 aa12.04□□□□□ -0.48
CD9-208ENST00000538834 NCK1P16333 377 aa12.04□□□□□ -0.48
CD9-208ENST00000538834 ZNF43P17038 809 aa12.04□□□□□ -0.48
CD9-208ENST00000538834 MPGP29372 298 aa12.04□□□□□ -0.48
CD9-208ENST00000538834 FAPQ12884 760 aa12.04□□□□□ -0.48
CD9-208ENST00000538834 FHL1Q13642 323 aa12.04□□□□□ -0.48
CD9-208ENST00000538834 OR7E24Q6IFN5 339 aa12.04□□□□□ -0.48
CD9-208ENST00000538834 PAMR1Q6UXH9 720 aa12.04□□□□□ -0.48
CD9-208ENST00000538834 ZNF627Q7L945 461 aa12.04□□□□□ -0.48
CD9-208ENST00000538834 GPAT4Q86UL3 456 aa12.04□□□□□ -0.48
CD9-208ENST00000538834 C17orf78Q8N4C9 275 aa12.04□□□□□ -0.48
CD9-208ENST00000538834 LRRC17Q8N6Y2 441 aa12.04□□□□□ -0.48
CD9-208ENST00000538834 CCDC197Q8NCU1 140 aa12.04□□□□□ -0.48
CD9-208ENST00000538834 MAGEE2Q8TD90 523 aaPredicted RBP12.04□□□□□ -0.48
CD9-208ENST00000538834 TMEM255BQ8WV15 326 aa12.04□□□□□ -0.48
CD9-208ENST00000538834 GEMIN6Q8WXD5 167 aaKnown RBP12.04□□□□□ -0.48
CD9-208ENST00000538834 LZICQ8WZA0 190 aa12.04□□□□□ -0.48
CD9-208ENST00000538834 NSL1Q96IY1 281 aa12.04□□□□□ -0.48
CD9-208ENST00000538834 DHRS1Q96LJ7 313 aa12.04□□□□□ -0.48
CD9-208ENST00000538834 OR2M2Q96R28 347 aa12.04□□□□□ -0.48
CD9-208ENST00000538834 CDRT15Q96T59 188 aa12.04□□□□□ -0.48
CD9-208ENST00000538834 FUZQ9BT04 418 aa12.04□□□□□ -0.48
CD9-208ENST00000538834 NPAP1Q9NZP6 1156 aa12.04□□□□□ -0.48
CD9-208ENST00000538834 NOX1Q9Y5S8 564 aa12.04□□□□□ -0.48
CD9-208ENST00000538834 DPRXA6NFQ7 191 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 UPK3AO75631 287 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 ATE1O95260 518 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 CD53P19397 219 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 IL32P24001 234 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 IST1P53990 364 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 NR1H2P55055 460 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 CLDN17P56750 224 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 LSM11P83369 360 aaKnown RBP eCLIP12.03□□□□□ -0.48
CD9-208ENST00000538834 LGALS3BPQ08380 585 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 PUDPQ08623 228 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 ST3GAL3Q11203 375 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 IFI44LQ53G44 452 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 SAMD4BQ5PRF9 694 aaKnown RBP12.03□□□□□ -0.48
CD9-208ENST00000538834 SPNS3Q6ZMD2 512 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 DEF8Q6ZN54 512 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 FAM86B1Q8N7N1 296 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 RBM15BQ8NDT2 890 aaKnown RBP12.03□□□□□ -0.48
CD9-208ENST00000538834 PIK3C3Q8NEB9 887 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 TMEM239Q8WW34 195 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 BCL2L2Q92843 193 aaPredicted RBP12.03□□□□□ -0.48
CD9-208ENST00000538834 ZC3HAV1LQ96H79 300 aaKnown RBP12.03□□□□□ -0.48
CD9-208ENST00000538834 TPD52L3Q96J77 140 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 HSH2DQ96JZ2 352 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 SEPHS2Q99611 448 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 ASPNQ9BXN1 380 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 C1orf21Q9H246 121 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 ANKRD19PQ9H560 264 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 SLC17A5Q9NRA2 495 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 C20orf141Q9NUB4 165 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 EGFL7Q9UHF1 273 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 ENPP4Q9Y6X5 453 aa12.03□□□□□ -0.48
CD9-208ENST00000538834 YLPM1P49750 1951 aaKnown RBP12.03□□□□□ -0.48
CD9-208ENST00000538834 J3KTA2 159 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 CH25HO95992 272 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 PLAUP00749 431 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 IFNW1P05000 195 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 PTNP21246 168 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 CBLP22681 906 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 MNAT1P51948 309 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 TAS2R41P59536 307 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 RPS4XP62701 263 aaKnown RBP12.02□□□□□ -0.49
CD9-208ENST00000538834 PMS2P3Q13401 168 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 STK11Q15831 433 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 PHYHD1Q5SRE7 291 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 C16orf89Q6UX73 402 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 C20orf196Q8IYI0 205 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 DEFB107AQ8IZN7 70 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 ARHGAP24Q8N264 748 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 RNF148Q8N7C7 305 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 FAM156AQ8NDB6 213 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 PFN4Q8NHR9 129 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 ZNF837Q96EG3 531 aaPredicted RBP12.02□□□□□ -0.49
CD9-208ENST00000538834 PIK3IP1Q96FE7 263 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 PLPPR2Q96GM1 343 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 TXNDC15Q96J42 360 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 FOXC2Q99958 501 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 NANSQ9NR45 359 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 NDE1Q9NXR1 346 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 TAS2R1Q9NYW7 299 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 ADA2Q9NZK5 511 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 NDUFAF4Q9P032 175 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 RPS6KA6Q9UK32 745 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 ACANP16112 2415 aa12.02□□□□□ -0.49
CD9-208ENST00000538834 TEP1Q99973 2627 aaKnown RBP12.02□□□□□ -0.49
CD9-208ENST00000538834 A0A087WUU8 490 aa12.01□□□□□ -0.49
CD9-208ENST00000538834 ARPC4-TTLL3A0A0A6YYG9 625 aa12.01□□□□□ -0.49
CD9-208ENST00000538834 NPIPB13A6NJU9 1138 aa12.01□□□□□ -0.49
CD9-208ENST00000538834 ENO4A6NNW6 628 aa12.01□□□□□ -0.49
CD9-208ENST00000538834 B2RBV5 119 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms