RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 PAN3Q58A45 887 aaKnown RBP6.33□□□□□ -1.4
CPSF7-215ENST00000536145 SLC35D3Q5M8T2 416 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 AVPI1Q5T686 147 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 C9orf64Q5T6V5 341 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 FHL5Q5TD97 284 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 LINC01590Q5TEZ4 76 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 FCRLBQ6BAA4 426 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 ELP2Q6IA86 826 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 FAM166AQ6J272 317 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 LPCAT3Q6P1A2 487 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 C3orf33Q6P1S2 294 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 ANKRD16Q6P6B7 361 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 ZNF613Q6PF04 617 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 FAM111BQ6SJ93 734 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 LINC00114Q6XXX2 140 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 GAREM2Q75VX8 874 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 SZRD1Q7Z422 152 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 ZNF546Q86UE3 836 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 RANBP3LQ86VV4 465 aaPredicted RBP6.33□□□□□ -1.4
CPSF7-215ENST00000536145 TRAPPC5Q8IUR0 188 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 MISPQ8IVT2 679 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 ZNF619Q8N2I2 560 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 ACOT4Q8N9L9 421 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 LINC01555Q8NAE3 123 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 TMEM229BQ8NBD8 167 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 SLC16A11Q8NCK7 471 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 OR7G2Q8NG99 324 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 OR4K14Q8NGD5 310 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 OR4A4PQ8NGN8 299 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 OR9A2Q8NGT5 310 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 NANPQ8TBE9 248 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 RXFP4Q8TDU9 374 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 DUSP19Q8WTR2 217 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 MYLIPQ8WY64 445 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 TFGQ92734 400 aaPredicted RBP6.33□□□□□ -1.4
CPSF7-215ENST00000536145 FGF13Q92913 245 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 BPIFA2Q96DR5 249 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 ZMYND19Q96E35 227 aaPredicted RBP6.33□□□□□ -1.4
CPSF7-215ENST00000536145 COX14Q96I36 57 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 CAPNS2Q96L46 248 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 ZNF75AQ96N20 296 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 PRAP1Q96NZ9 151 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 TNFRSF13CQ96RJ3 184 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 CNN2Q99439 309 aaKnown RBP6.33□□□□□ -1.4
CPSF7-215ENST00000536145 SDF2Q99470 211 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 CMSS1Q9BQ75 279 aaKnown RBP6.33□□□□□ -1.4
CPSF7-215ENST00000536145 ZNF251Q9BRH9 671 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 ZNF768Q9H5H4 540 aaKnown RBP6.33□□□□□ -1.4
CPSF7-215ENST00000536145 C6orf106Q9H6K1 298 aaPredicted RBP6.33□□□□□ -1.4
CPSF7-215ENST00000536145 SYNPO2LQ9H987 977 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 TRPV4Q9HBA0 871 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 GSN-AS1Q9NRJ2 163 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 FLRT3Q9NZU0 649 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 SLC23A2Q9UGH3 650 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 APOBEC3BQ9UH17 382 aaKnown RBP6.33□□□□□ -1.4
CPSF7-215ENST00000536145 STEAP1Q9UHE8 339 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 ZNF230Q9UIE0 474 aaPredicted RBP6.33□□□□□ -1.4
CPSF7-215ENST00000536145 MKL2Q9ULH7 1088 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 PCDHB10Q9UN67 800 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 LHX6Q9UPM6 363 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 ASF1AQ9Y294 204 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 MED31Q9Y3C7 131 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 PRKAB1Q9Y478 270 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 WDR45Q9Y484 360 aa6.33□□□□□ -1.4
CPSF7-215ENST00000536145 TP53BP1Q12888 1972 aaPredicted RBP6.32□□□□□ -1.4
CPSF7-215ENST00000536145 TRAV27A0A087WT01 109 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 A0A087WV48 116 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 TRBV6-7A0A0A0MS04 114 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 KANTRA0A1W2PQU2 76 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 OR2W5A6NFC9 320 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 LRRC72A6NJI9 287 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 DUXAA6NLW8 204 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 OR6C76A6NM76 312 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 K7ESM1 405 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 SULT1C2O00338 296 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 UBE2CO00762 179 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 HOXA2O43364 376 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 GATCO43716 136 aaKnown RBP6.32□□□□□ -1.4
CPSF7-215ENST00000536145 EIF1BO60739 113 aaKnown RBP6.32□□□□□ -1.4
CPSF7-215ENST00000536145 ERAL1O75616 437 aaKnown RBP6.32□□□□□ -1.4
CPSF7-215ENST00000536145 CTAG2O75638 210 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 ZFPL1O95159 310 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 WNT11O96014 354 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 AK1P00568 194 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 IFNGP01579 166 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 SOD2P04179 222 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 CD74P04233 296 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 S100A8P05109 93 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 GYPBP06028 91 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 DBIP07108 87 aaKnown RBP6.32□□□□□ -1.4
CPSF7-215ENST00000536145 FABP1P07148 127 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 OR4E1P0C645 316 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 ELFN1P0C7U0 828 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 FAM157CP0CG43 387 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 NID1P14543 1247 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 EPCAMP16422 314 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 SYN1P17600 705 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 ZBTB25P24278 435 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 MPZP25189 248 aa6.32□□□□□ -1.4
CPSF7-215ENST00000536145 MPIP34949 423 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms