RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 IDO2Q6ZQW0 420 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 GKN2Q86XP6 184 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 SLC35F3Q8IY50 421 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 ZNF563Q8TA94 476 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 PTPMT1Q8WUK0 201 aaPredicted RBP11.99□□□□□ -0.49
LDLR-203ENST00000535915 CACNG6Q9BXT2 260 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.99□□□□□ -0.49
LDLR-203ENST00000535915 OR8D2Q9GZM6 311 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 NXF5Q9H1B4 397 aaKnown RBP11.99□□□□□ -0.49
LDLR-203ENST00000535915 MMP25Q9NPA2 562 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 GMEB2Q9UKD1 530 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 HSPB11Q9Y547 144 aa11.99□□□□□ -0.49
LDLR-203ENST00000535915 CACNA1CQ13936 2221 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 TMEM72A0PK05 275 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 PRR32B1ATL7 298 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 H0YIG0 161 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 ZNF780AO75290 641 aaPredicted RBP11.98□□□□□ -0.49
LDLR-203ENST00000535915 ZFPL1O95159 310 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 UTS2O95399 124 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 IL33O95760 270 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 STOMP27105 288 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 NUDT1P36639 197 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 ADH7P40394 386 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 CCR6P51684 374 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 SLC37A1P57057 533 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 FAM122BQ7Z309 247 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 SLC51BQ86UW2 128 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 CMTM4Q8IZR5 234 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 PHYHIPQ92561 330 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 SCMH1Q96GD3 660 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 CCNL2Q96S94 520 aaPredicted RBP11.98□□□□□ -0.49
LDLR-203ENST00000535915 AUNIPQ9H7T9 357 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 SRA1Q9HD15 236 aaKnown RBP11.98□□□□□ -0.49
LDLR-203ENST00000535915 PCDHGA9Q9Y5G4 932 aaKnown RBP11.98□□□□□ -0.49
LDLR-203ENST00000535915 PCNX3Q9H6A9 2034 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 PDCD5O14737 125 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 MT-ND4P03905 459 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 WNT1P04628 370 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 OR8G3PP0DMU2 310 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 SDHAP31040 664 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 GALNSP34059 522 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 EGR4Q05215 589 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 KCNAB1Q14722 419 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 SLC16A9Q7RTY1 509 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 FAM220AQ7Z4H9 259 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 PRR22Q8IZ63 422 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 ADAMTS14Q8WXS8 1223 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 HYLS1Q96M11 299 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 ADAD1Q96M93 576 aaKnown RBP11.98□□□□□ -0.49
LDLR-203ENST00000535915 TRAF4Q9BUZ4 470 aaPredicted RBP11.98□□□□□ -0.49
LDLR-203ENST00000535915 GHITMQ9H3K2 345 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 COPZ2Q9P299 210 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 GRHPRQ9UBQ7 328 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 ZNF222Q9UK12 451 aa11.98□□□□□ -0.49
LDLR-203ENST00000535915 C7orf66A4D0T2 115 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 TRABD2BA6NFA1 517 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 TLCD2A6NGC4 264 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 LILRA5A6NI73 299 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 IFITM5A6NNB3 132 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 TMEM150CB9EJG8 249 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 H7C1C5 153 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 FABP7O15540 132 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 ADRB1P08588 477 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 TACSTD2P09758 323 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 GLULP15104 373 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 NME1P15531 152 aaKnown RBP11.97□□□□□ -0.49
LDLR-203ENST00000535915 MST1P26927 711 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 PTGS2P35354 604 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 PPICP45877 212 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 OR1D4P47884 311 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 LCN6P62502 163 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 SNTB2Q13425 540 aaKnown RBP11.97□□□□□ -0.49
LDLR-203ENST00000535915 GRM7Q14831 915 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 NKAIN2Q5VXU1 208 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 TTLL10Q6ZVT0 673 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 LINGO2Q7L985 606 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 TMEM151BQ8IW70 566 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 SNAPC3Q92966 411 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 GAL3ST4Q96RP7 486 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 ADOQ96SZ5 270 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 LPAR4Q99677 370 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 GFI1Q99684 422 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 TSPAN10Q9H1Z9 355 aaPredicted RBP11.97□□□□□ -0.49
LDLR-203ENST00000535915 SLC6A5Q9Y345 797 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 A0A087WV48 116 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 IGF2P01344 180 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 ANKRD34CP0C6C1 535 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 ASAH2BP0C7U1 165 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 SDHBP21912 280 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 RORAP35398 523 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 SLC25A1P53007 311 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 LTBQ06643 244 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 BIKQ13323 160 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 ZNF684Q5T5D7 378 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 SLC6A19Q695T7 634 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 LAMTOR1Q6IAA8 161 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 BMPERQ8N8U9 685 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 LRRC75AQ8NAA5 344 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 TSTD1Q8NFU3 115 aa11.97□□□□□ -0.49
LDLR-203ENST00000535915 OR11H7Q8NGC8 314 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms