RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 OR51F2Q8NH61 342 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 NANPQ8TBE9 248 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 BCAS4Q8TDM0 211 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 XAGE5Q8WWM1 108 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 PIK3R3Q92569 461 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 CNRIP1Q96F85 164 aaPredicted RBP2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 OTUB1Q96FW1 271 aaPredicted RBP2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 PDLIM5Q96HC4 596 aaKnown RBP2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 REXO5Q96IC2 774 aaKnown RBP2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 MS4A14Q96JA4 679 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 KLHL15Q96M94 604 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 EFCAB11Q9BUY7 163 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 MRPL1Q9BYD6 325 aaKnown RBP2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 TRIM31Q9BZY9 425 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 DPH5Q9H2P9 285 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 PTGES2Q9H7Z7 377 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 COQ10BQ9H8M1 238 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 CAB39LQ9H9S4 337 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 FKRPQ9H9S5 495 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 WDR41Q9HAD4 459 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 SAYSD1Q9NPB0 183 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 PPANQ9NQ55 473 aaKnown RBP2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 HEYLQ9NQ87 328 aaPredicted RBP2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 SLC17A5Q9NRA2 495 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 SDHAF3Q9NRP4 125 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 DUSP22Q9NRW4 184 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 CA10Q9NS85 328 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 ZNF275Q9NSD4 429 aaPredicted RBP2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 TBC1D23Q9NUY8 699 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 ETAA1Q9NY74 926 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 CD274Q9NZQ7 290 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 FZR1Q9UM11 496 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 RNF11Q9Y3C5 154 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 CAPN7Q9Y6W3 813 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 DNAH10Q8IVF4 4471 aa2.52□□□□□ -2.01
CHMP4A-208ENST00000534106 PCNX3Q9H6A9 2034 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 STAB2Q8WWQ8 2551 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 A0A087WUV0 522 aaPredicted RBP2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 IGLV3-32A0A0A0MS00 114 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 H0YL77 283 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 H3BNX3 289 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 K7EIL1 84 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 UBXN8O00124 270 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 KERAO60938 352 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 COQ9O75208 318 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 H6PDO95479 791 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 PPP1R3DO95685 299 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 KRT14P02533 472 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 CSTBP04080 98 aaKnown RBP2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 ATP1B1P05026 303 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 LINGO3P0C6S8 592 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 PABPC4LP0CB38 370 aaKnown RBP2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 IGHV4-38-2P0DP08 117 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 PCMT1P22061 227 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 GSTM2P28161 218 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 PRKAR1BP31321 381 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 GABRA3P34903 492 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 LIPAP38571 399 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 HNMTP50135 292 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 PPOXP50336 477 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 CDKL1Q00532 357 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 C17orf67Q0P5P2 114 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 ZNF155Q12901 538 aaPredicted RBP2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 FOXF1Q12946 379 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 DLG1Q12959 904 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 SCGB2A2Q13296 93 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 PMS2P11Q13670 270 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 E2F2Q14209 437 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 CRYMQ14894 314 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 MORF4L2Q15014 288 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 RNPS1Q15287 305 aaKnown RBP2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 RBMS2Q15434 407 aaKnown RBP2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 CD226Q15762 336 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 CCNG2Q16589 344 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 TAF9Q16594 264 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 ATP6AP1LQ52LC2 224 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 PLA1AQ53H76 456 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 DEFB121Q5J5C9 76 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 PDSS1Q5T2R2 415 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 KPRPQ5T749 579 aaPredicted RBP2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 C6orf163Q5TEZ5 329 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 DCAF12L2Q5VW00 463 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 OLFML2AQ68BL7 652 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 SULT1C3Q6IMI6 304 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 GRHL2Q6ISB3 625 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 ACSM5Q6NUN0 579 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 TTC27Q6P3X3 843 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 FIP1L1Q6UN15 594 aaKnown RBP2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 CBLN3Q6UW01 205 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 CCDC91Q7Z6B0 441 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 TBC1D1Q86TI0 1168 aaPredicted RBP2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 TRABD2AQ86V40 505 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 P2RY8Q86VZ1 359 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 IFT20Q8IY31 132 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 LYG1Q8N1E2 194 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 RIBC1Q8N443 379 aaPredicted RBP2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 NKAPQ8N5F7 415 aaKnown RBP2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 TEX9Q8N6V9 391 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 UBL4BQ8N7F7 174 aa2.51□□□□□ -2.01
CHMP4A-208ENST00000534106 C7orf57Q8NEG2 295 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms