RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 ACPTQ9BZG2 426 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 NMUR2Q9GZQ4 415 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 LAT2Q9GZY6 243 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 SAP30LQ9HAJ7 183 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 DECR2Q9NUI1 292 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 TAS2R7Q9NYW3 318 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 TAAR3PQ9P1P4 343 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 GPR160Q9UJ42 338 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 GUCA1BQ9UMX6 200 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 TRAPPC4Q9Y296 219 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 DTNAQ9Y4J8 743 aa5.42□□□□□ -1.54
CD44-237ENST00000534082 FRAS1Q86XX4 4008 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 CCDC189A1A4V9 331 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 NPIPB9F8W1W9 429 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 MANBAO00462 879 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 PPP6CO00743 305 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 ANKRD28O15084 1053 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 PDPK1O15530 556 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 OTCP00480 354 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 SFTPBP07988 381 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 UBTFL6P0CB48 400 aaPredicted RBP5.41□□□□□ -1.54
CD44-237ENST00000534082 IMPDH2P12268 514 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 ZNF35P13682 527 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 JUNBP17275 347 aaPredicted RBP5.41□□□□□ -1.54
CD44-237ENST00000534082 TSPAN8P19075 237 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 CCNA2P20248 432 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 MAKP20794 623 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 IVDP26440 423 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 SLC6A9P48067 706 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 CLK1P49759 484 aaKnown RBP5.41□□□□□ -1.54
CD44-237ENST00000534082 ARL4CP56559 192 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 SLC3A1Q07837 685 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 PDIA2Q13087 525 aaKnown RBP5.41□□□□□ -1.54
CD44-237ENST00000534082 HERPUD1Q15011 391 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 TSTQ16762 297 aaKnown RBP5.41□□□□□ -1.54
CD44-237ENST00000534082 FAM83EQ2M2I3 478 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 NRN1LQ496H8 165 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 DCST2Q5T1A1 773 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 CASC10Q5T4H9 136 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 FAM71E1Q6IPT2 247 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 NIPAL3Q6P499 406 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 RPS27LQ71UM5 84 aaKnown RBP5.41□□□□□ -1.54
CD44-237ENST00000534082 GPAT4Q86UL3 456 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 CMIPQ8IY22 773 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 ZSCAN4Q8NAM6 433 aaPredicted RBP5.41□□□□□ -1.54
CD44-237ENST00000534082 MGARPQ8TDB4 240 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 ADAMTS15Q8TE58 950 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 PHF21BQ96EK2 531 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 FAM71F1Q96KD3 344 aaPredicted RBP5.41□□□□□ -1.54
CD44-237ENST00000534082 HRASLS5Q96KN8 279 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 DIRC2Q96SL1 478 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 STACQ99469 402 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 SF3B5Q9BWJ5 86 aaKnown RBP5.41□□□□□ -1.54
CD44-237ENST00000534082 SERHL2Q9H4I8 314 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 C16orf95Q9H693 158 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 DENND2DQ9H6A0 471 aaPredicted RBP5.41□□□□□ -1.54
CD44-237ENST00000534082 DUSP22Q9NRW4 184 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 U3KQK5 164 aa5.41□□□□□ -1.54
CD44-237ENST00000534082 ZNF816-ZNF321PA0A0X1KG74 233 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 WI2-2373I1.2A0A1W2PRP0 233 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 OR4F21O95013 312 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 AKR7A3O95154 331 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 TGDSO95455 350 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 CLPTM1O96005 669 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 CSTAP01040 98 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 IGHV2-70P01814 119 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 IGHV4-59P01825 116 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 HLA-HP01893 362 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 KRT6AP02538 564 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 KRT6BP04259 564 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 RPS17P08708 135 aaKnown RBP5.4□□□□□ -1.54
CD44-237ENST00000534082 ZNF14P17017 642 aaPredicted RBP5.4□□□□□ -1.54
CD44-237ENST00000534082 FKBP2P26885 142 aaKnown RBP5.4□□□□□ -1.54
CD44-237ENST00000534082 SPRP35270 261 aaPredicted RBP5.4□□□□□ -1.54
CD44-237ENST00000534082 KRT6CP48668 564 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 HTR6P50406 440 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 KLF3P57682 345 aaPredicted RBP5.4□□□□□ -1.54
CD44-237ENST00000534082 BTKQ06187 659 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 BST1Q10588 318 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 HNRNPA0Q13151 305 aaKnown RBP5.4□□□□□ -1.54
CD44-237ENST00000534082 LASP1Q14847 261 aaKnown RBP5.4□□□□□ -1.54
CD44-237ENST00000534082 LARS2Q15031 903 aaKnown RBP5.4□□□□□ -1.54
CD44-237ENST00000534082 GSG1Q2KHT4 349 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 ESCO2Q56NI9 601 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 PDZK1Q5T2W1 519 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 GPR157Q5UAW9 335 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 RGS7BPQ6MZT1 257 aaPredicted RBP5.4□□□□□ -1.54
CD44-237ENST00000534082 ANKRD26P1Q6NSI1 321 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 ZCCHC12Q6PEW1 402 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 BTNL3Q6UXE8 466 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 GRINAQ7Z429 371 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 WFDC3Q8IUB2 231 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 KLHL36Q8N4N3 616 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 SPICQ8N5J4 248 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 POU5F2Q8N7G0 328 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 TMEM99Q8N816 258 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 C11orf44Q8N8P7 122 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 OR4S1Q8NGB4 309 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 ZFP28Q8NHY6 868 aa5.4□□□□□ -1.54
CD44-237ENST00000534082 ZNF563Q8TA94 476 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms