RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 LSM5Q9Y4Y9 91 aaKnown RBP16.19■□□□□ 0.18
PHRF1-205ENST00000533464 PRR35P0CG20 571 aa16.19■□□□□ 0.18
PHRF1-205ENST00000533464 ICAM2P13598 275 aa16.19■□□□□ 0.18
PHRF1-205ENST00000533464 MSX1P28360 303 aa16.19■□□□□ 0.18
PHRF1-205ENST00000533464 GDNFP39905 211 aa16.19■□□□□ 0.18
PHRF1-205ENST00000533464 HNRNPFP52597 415 aaKnown RBP16.19■□□□□ 0.18
PHRF1-205ENST00000533464 TM9SF4Q92544 642 aa16.19■□□□□ 0.18
PHRF1-205ENST00000533464 RNF167Q9H6Y7 350 aa16.19■□□□□ 0.18
PHRF1-205ENST00000533464 RANGRFQ9HD47 186 aaPredicted RBP16.19■□□□□ 0.18
PHRF1-205ENST00000533464 A8MVM7 634 aa16.19■□□□□ 0.18
PHRF1-205ENST00000533464 OR8U9P0C7N5 309 aa16.19■□□□□ 0.18
PHRF1-205ENST00000533464 PRPH2P23942 346 aa16.19■□□□□ 0.18
PHRF1-205ENST00000533464 CNN3Q15417 329 aaKnown RBP16.19■□□□□ 0.18
PHRF1-205ENST00000533464 DCAF12Q5T6F0 453 aa16.19■□□□□ 0.18
PHRF1-205ENST00000533464 ESPNLQ6ZVH7 1005 aa16.19■□□□□ 0.18
PHRF1-205ENST00000533464 LINC00346Q8IVM7 164 aa16.19■□□□□ 0.18
PHRF1-205ENST00000533464 PRR18Q8N4B5 295 aa16.19■□□□□ 0.18
PHRF1-205ENST00000533464 BPIFB2Q8N4F0 458 aa16.19■□□□□ 0.18
PHRF1-205ENST00000533464 C12orf45Q8N5I9 185 aaPredicted RBP16.19■□□□□ 0.18
PHRF1-205ENST00000533464 A0A1B0GV50 99 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 ZAR1LA6NP61 321 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 PLRG1O43660 514 aaKnown RBP16.18■□□□□ 0.18
PHRF1-205ENST00000533464 DPP4P27487 766 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 EPHA4P54764 986 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 ELAVL1Q15717 326 aaKnown RBP16.18■□□□□ 0.18
PHRF1-205ENST00000533464 ZMAT1Q5H9K5 638 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 ZBTB8AQ96BR9 441 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 OR2M2Q96R28 347 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 LAMB2P55268 1798 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 EPHA2P29317 976 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 ETV5P41161 510 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 ETV1P50549 477 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 LCN10Q6JVE6 187 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 KIF18BQ86Y91 864 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 OR56B4Q8NH76 319 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 BOKQ9UMX3 212 aaPredicted RBP16.18■□□□□ 0.18
PHRF1-205ENST00000533464 SSR4P51571 173 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 CAV2P51636 162 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 TRIM61Q5EBN2 209 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 TEX101Q9BY14 249 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 HINT3Q9NQE9 182 aaKnown RBP16.18■□□□□ 0.18
PHRF1-205ENST00000533464 EMC9Q9Y3B6 208 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 TMEM129A0AVI4 362 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 SELENOFO60613 162 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 MRPL33O75394 65 aaKnown RBP16.18■□□□□ 0.18
PHRF1-205ENST00000533464 UBL3O95164 117 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 HOXC8P31273 242 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 TGFBR3Q03167 851 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 FGL2Q14314 439 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 COMMD7Q86VX2 200 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 PM20D2Q8IYS1 436 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 SLC7A5P1Q8MH63 180 aa16.18■□□□□ 0.18
PHRF1-205ENST00000533464 ANKRD30BLA7E2S9 258 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 SBK2P0C263 348 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 DLSTP36957 453 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 RHEBQ15382 184 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 PAQR6Q6TCH4 344 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 ZNF620Q6ZNG0 422 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 CMTM1Q8IZ96 169 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 KDM8Q8N371 416 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 ZNF454Q8N9F8 522 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 PHF7Q9BWX1 381 aaPredicted RBP16.17■□□□□ 0.18
PHRF1-205ENST00000533464 BCL2L10Q9HD36 194 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 PLCXD1Q9NUJ7 323 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 NXT1Q9UKK6 140 aaKnown RBP16.17■□□□□ 0.18
PHRF1-205ENST00000533464 A3GALT2U3KPV4 340 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 DOCK1Q14185 1865 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 UPK1AO00322 258 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 PPM1DO15297 605 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 PIPP12273 146 aaPredicted RBP16.17■□□□□ 0.18
PHRF1-205ENST00000533464 CASP3P42574 277 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 SEC61A1P61619 476 aaKnown RBP16.17■□□□□ 0.18
PHRF1-205ENST00000533464 GPLD1P80108 840 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 STK11Q15831 433 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 PIGCQ92535 297 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 CNRIP1Q96F85 164 aaPredicted RBP16.17■□□□□ 0.18
PHRF1-205ENST00000533464 VRK1Q99986 396 aaPredicted RBP16.17■□□□□ 0.18
PHRF1-205ENST00000533464 RGCCQ9H4X1 137 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 SLC6A13Q9NSD5 602 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 PIGBOS1A0A0B4J2F0 54 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 LINC01565O15544 149 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 ALOX12BO75342 701 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 MCCD1P59942 119 aaPredicted RBP16.17■□□□□ 0.18
PHRF1-205ENST00000533464 PCBD1P61457 104 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 ALKBH1Q13686 389 aaKnown RBP16.17■□□□□ 0.18
PHRF1-205ENST00000533464 SLC16A14Q7RTX9 510 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 CELF2-AS1Q8N7Q2 184 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 GIMAP1Q8WWP7 306 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 PDCD1LG2Q9BQ51 273 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 EMC3Q9P0I2 261 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 KLHL13Q9P2N7 655 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 SMCO3A2RU48 225 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 GLCEO94923 617 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 KCNK2O95069 426 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 OLFM2O95897 454 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 PSMB1P20618 241 aaKnown RBP16.17■□□□□ 0.18
PHRF1-205ENST00000533464 HTR2CP28335 458 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 C1orf140Q5VVS0 124 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 OR6F1Q8NGZ6 308 aa16.17■□□□□ 0.18
PHRF1-205ENST00000533464 EID2BQ96D98 161 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms