RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 C18orf12Q96KH6 178 aa26.53■■□□□ 1.84
SSSCA1-207ENST00000533115 PCDHAC1Q9H158 963 aa26.53■■□□□ 1.84
SSSCA1-207ENST00000533115 TRAPPC13A5PLN9 417 aa26.52■■□□□ 1.84
SSSCA1-207ENST00000533115 SLC43A1O75387 559 aa26.52■■□□□ 1.84
SSSCA1-207ENST00000533115 LYPD3O95274 346 aa26.52■■□□□ 1.84
SSSCA1-207ENST00000533115 WNT11O96014 354 aa26.52■■□□□ 1.84
SSSCA1-207ENST00000533115 THY1P04216 161 aa26.52■■□□□ 1.84
SSSCA1-207ENST00000533115 SPOCK1Q08629 439 aa26.52■■□□□ 1.84
SSSCA1-207ENST00000533115 SLC22A25Q6T423 547 aa26.52■■□□□ 1.84
SSSCA1-207ENST00000533115 KLHL24Q6TFL4 600 aa26.52■■□□□ 1.84
SSSCA1-207ENST00000533115 UEVLDQ8IX04 471 aa26.52■■□□□ 1.84
SSSCA1-207ENST00000533115 PROX1Q92786 737 aa26.52■■□□□ 1.84
SSSCA1-207ENST00000533115 Q96MF0 132 aa26.52■■□□□ 1.84
SSSCA1-207ENST00000533115 MRPL39Q9NYK5 338 aaKnown RBP26.52■■□□□ 1.84
SSSCA1-207ENST00000533115 C2CD3Q4AC94 2353 aa26.51■■□□□ 1.84
SSSCA1-207ENST00000533115 LRRN3E7EW58 273 aa26.51■■□□□ 1.83
SSSCA1-207ENST00000533115 OVOL3O00110 214 aa26.51■■□□□ 1.83
SSSCA1-207ENST00000533115 TRAF3IP2O43734 574 aaPredicted RBP26.51■■□□□ 1.83
SSSCA1-207ENST00000533115 AKAP8O43823 692 aaKnown RBP26.51■■□□□ 1.83
SSSCA1-207ENST00000533115 HPRP00739 348 aa26.51■■□□□ 1.83
SSSCA1-207ENST00000533115 ATP5J2P56134 94 aa26.51■■□□□ 1.83
SSSCA1-207ENST00000533115 PMS2P3Q13401 168 aa26.51■■□□□ 1.83
SSSCA1-207ENST00000533115 HMBOX1Q6NT76 420 aa26.51■■□□□ 1.83
SSSCA1-207ENST00000533115 WDR88Q6ZMY6 472 aa26.51■■□□□ 1.83
SSSCA1-207ENST00000533115 TSPYL5Q86VY4 417 aaPredicted RBP26.51■■□□□ 1.83
SSSCA1-207ENST00000533115 OBP2BQ9NPH6 170 aa26.51■■□□□ 1.83
SSSCA1-207ENST00000533115 BAG5Q9UL15 447 aa26.51■■□□□ 1.83
SSSCA1-207ENST00000533115 SLC7A7Q9UM01 511 aa26.51■■□□□ 1.83
SSSCA1-207ENST00000533115 FAM220BPB1ANY3 271 aa26.5■■□□□ 1.83
SSSCA1-207ENST00000533115 CCDC22O60826 627 aa26.5■■□□□ 1.83
SSSCA1-207ENST00000533115 MT-ATP6P00846 226 aa26.5■■□□□ 1.83
SSSCA1-207ENST00000533115 ROR2Q01974 943 aaKnown RBP26.5■■□□□ 1.83
SSSCA1-207ENST00000533115 TBRG1Q3YBR2 411 aa26.5■■□□□ 1.83
SSSCA1-207ENST00000533115 TTC33Q6PID6 262 aaPredicted RBP26.5■■□□□ 1.83
SSSCA1-207ENST00000533115 DEPDC4Q8N2C3 294 aa26.5■■□□□ 1.83
SSSCA1-207ENST00000533115 ANKK1Q8NFD2 765 aa26.5■■□□□ 1.83
SSSCA1-207ENST00000533115 OR2M2Q96R28 347 aa26.5■■□□□ 1.83
SSSCA1-207ENST00000533115 GSX1Q9H4S2 264 aaPredicted RBP26.5■■□□□ 1.83
SSSCA1-207ENST00000533115 FAIMQ9NVQ4 179 aa26.5■■□□□ 1.83
SSSCA1-207ENST00000533115 POU2F3Q9UKI9 436 aa26.5■■□□□ 1.83
SSSCA1-207ENST00000533115 SH3GLB1Q9Y371 365 aa26.5■■□□□ 1.83
SSSCA1-207ENST00000533115 RPL36A-HNRNPH2H7BZ11 118 aa26.49■■□□□ 1.83
SSSCA1-207ENST00000533115 IFNA14P01570 189 aa26.49■■□□□ 1.83
SSSCA1-207ENST00000533115 HLA-DOBP13765 273 aa26.49■■□□□ 1.83
SSSCA1-207ENST00000533115 SH3BGRP55822 239 aaPredicted RBP26.49■■□□□ 1.83
SSSCA1-207ENST00000533115 PUDPQ08623 228 aa26.49■■□□□ 1.83
SSSCA1-207ENST00000533115 CARM1Q86X55 608 aa26.49■■□□□ 1.83
SSSCA1-207ENST00000533115 TMEM123Q8N131 208 aa26.49■■□□□ 1.83
SSSCA1-207ENST00000533115 GPR137CQ8N3F9 429 aa26.49■■□□□ 1.83
SSSCA1-207ENST00000533115 PIK3C3Q8NEB9 887 aa26.49■■□□□ 1.83
SSSCA1-207ENST00000533115 OR2T12Q8NG77 320 aa26.49■■□□□ 1.83
SSSCA1-207ENST00000533115 BCL2L2Q92843 193 aaPredicted RBP26.49■■□□□ 1.83
SSSCA1-207ENST00000533115 GTPBP3Q969Y2 492 aaKnown RBP26.49■■□□□ 1.83
SSSCA1-207ENST00000533115 MPP4Q96JB8 637 aa26.49■■□□□ 1.83
SSSCA1-207ENST00000533115 TRAF4Q9BUZ4 470 aaPredicted RBP26.49■■□□□ 1.83
SSSCA1-207ENST00000533115 E7EQL1 145 aa26.48■■□□□ 1.83
SSSCA1-207ENST00000533115 PLPP3O14495 311 aa26.48■■□□□ 1.83
SSSCA1-207ENST00000533115 CD8AP01732 235 aa26.48■■□□□ 1.83
SSSCA1-207ENST00000533115 INHBBP09529 407 aa26.48■■□□□ 1.83
SSSCA1-207ENST00000533115 COX4I1P13073 169 aa26.48■■□□□ 1.83
SSSCA1-207ENST00000533115 POU3F1Q03052 451 aaPredicted RBP26.48■■□□□ 1.83
SSSCA1-207ENST00000533115 DTX2Q86UW9 622 aa26.48■■□□□ 1.83
SSSCA1-207ENST00000533115 OR5J2Q8NH18 312 aa26.48■■□□□ 1.83
SSSCA1-207ENST00000533115 MAGEE2Q8TD90 523 aaPredicted RBP26.48■■□□□ 1.83
SSSCA1-207ENST00000533115 TRMT61AQ96FX7 289 aaKnown RBP26.48■■□□□ 1.83
SSSCA1-207ENST00000533115 ALG2Q9H553 416 aa26.48■■□□□ 1.83
SSSCA1-207ENST00000533115 GPR35Q9HC97 309 aa26.48■■□□□ 1.83
SSSCA1-207ENST00000533115 NOX1Q9Y5S8 564 aa26.48■■□□□ 1.83
SSSCA1-207ENST00000533115 NF1P21359 2839 aa26.48■■□□□ 1.83
SSSCA1-207ENST00000533115 PLCE1Q9P212 2302 aa26.48■■□□□ 1.83
SSSCA1-207ENST00000533115 TNFRSF1BP20333 461 aa26.47■■□□□ 1.83
SSSCA1-207ENST00000533115 CDKN1AP38936 164 aa26.47■■□□□ 1.83
SSSCA1-207ENST00000533115 ANKRD16Q6P6B7 361 aa26.47■■□□□ 1.83
SSSCA1-207ENST00000533115 NHLRC1Q6VVB1 395 aa26.47■■□□□ 1.83
SSSCA1-207ENST00000533115 ARPINQ7Z6K5 226 aa26.47■■□□□ 1.83
SSSCA1-207ENST00000533115 BIVMQ86UB2 503 aa26.47■■□□□ 1.83
SSSCA1-207ENST00000533115 DHRS9Q9BPW9 319 aa26.47■■□□□ 1.83
SSSCA1-207ENST00000533115 BDH2Q9BUT1 245 aa26.47■■□□□ 1.83
SSSCA1-207ENST00000533115 ZNF426Q9BUY5 554 aa26.47■■□□□ 1.83
SSSCA1-207ENST00000533115 SLC19A3Q9BZV2 496 aa26.47■■□□□ 1.83
SSSCA1-207ENST00000533115 GRIP2Q9C0E4 1043 aa26.47■■□□□ 1.83
SSSCA1-207ENST00000533115 CMTM6Q9NX76 183 aa26.47■■□□□ 1.83
SSSCA1-207ENST00000533115 AP3M1Q9Y2T2 418 aa26.47■■□□□ 1.83
SSSCA1-207ENST00000533115 ARPC4-TTLL3A0A0A6YYG9 625 aa26.46■■□□□ 1.83
SSSCA1-207ENST00000533115 PAX7P23759 505 aa26.46■■□□□ 1.83
SSSCA1-207ENST00000533115 KDELR2P33947 212 aa26.46■■□□□ 1.83
SSSCA1-207ENST00000533115 UBE2NP61088 152 aaKnown RBP26.46■■□□□ 1.83
SSSCA1-207ENST00000533115 ZNF74Q16587 644 aa26.46■■□□□ 1.83
SSSCA1-207ENST00000533115 SPATA21Q7Z572 469 aa26.46■■□□□ 1.83
SSSCA1-207ENST00000533115 PXKQ7Z7A4 578 aa26.46■■□□□ 1.83
SSSCA1-207ENST00000533115 MICU2Q8IYU8 434 aa26.46■■□□□ 1.83
SSSCA1-207ENST00000533115 PRSS27Q9BQR3 290 aa26.46■■□□□ 1.83
SSSCA1-207ENST00000533115 NELFAQ9H3P2 528 aa26.46■■□□□ 1.83
SSSCA1-207ENST00000533115 FKRPQ9H9S5 495 aa26.46■■□□□ 1.83
SSSCA1-207ENST00000533115 MED29Q9NX70 200 aa26.46■■□□□ 1.83
SSSCA1-207ENST00000533115 A0A096LPE4 126 aa26.45■■□□□ 1.82
SSSCA1-207ENST00000533115 A0A1W2PPZ6 126 aa26.45■■□□□ 1.82
SSSCA1-207ENST00000533115 ELOVL7A1L3X0 281 aa26.45■■□□□ 1.82
SSSCA1-207ENST00000533115 CH25HO95992 272 aa26.45■■□□□ 1.82
SSSCA1-207ENST00000533115 ADORA3P0DMS8 318 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms