RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 TMEM108Q6UXF1 575 aa20.16■□□□□ 0.82
CAPN1-222ENST00000532285 FBXW5Q969U6 566 aa20.16■□□□□ 0.82
CAPN1-222ENST00000532285 ZNF426Q9BUY5 554 aa20.16■□□□□ 0.82
CAPN1-222ENST00000532285 MGAT4BQ9UQ53 548 aa20.16■□□□□ 0.82
CAPN1-222ENST00000532285 LRRN3E7EW58 273 aa20.15■□□□□ 0.82
CAPN1-222ENST00000532285 NME4O00746 187 aa20.15■□□□□ 0.82
CAPN1-222ENST00000532285 PLPP3O14495 311 aa20.15■□□□□ 0.82
CAPN1-222ENST00000532285 TRAF3IP2O43734 574 aaPredicted RBP20.15■□□□□ 0.82
CAPN1-222ENST00000532285 TMCC2O75069 709 aa20.15■□□□□ 0.82
CAPN1-222ENST00000532285 UPK3AO75631 287 aa20.15■□□□□ 0.82
CAPN1-222ENST00000532285 HPRP00739 348 aa20.15■□□□□ 0.82
CAPN1-222ENST00000532285 CDH2P19022 906 aaPredicted RBP20.15■□□□□ 0.82
CAPN1-222ENST00000532285 PTAFRP25105 342 aa20.15■□□□□ 0.82
CAPN1-222ENST00000532285 ZNF83P51522 516 aa20.15■□□□□ 0.82
CAPN1-222ENST00000532285 SLC7A2P52569 658 aa20.15■□□□□ 0.82
CAPN1-222ENST00000532285 TAS2R41P59536 307 aa20.15■□□□□ 0.82
CAPN1-222ENST00000532285 PRPS1P60891 318 aa20.15■□□□□ 0.82
CAPN1-222ENST00000532285 NKX6-1P78426 367 aaPredicted RBP20.15■□□□□ 0.82
CAPN1-222ENST00000532285 PUDPQ08623 228 aa20.15■□□□□ 0.82
CAPN1-222ENST00000532285 HMBOX1Q6NT76 420 aa20.15■□□□□ 0.82
CAPN1-222ENST00000532285 DEF8Q6ZN54 512 aa20.15■□□□□ 0.82
CAPN1-222ENST00000532285 ANKK1Q8NFD2 765 aa20.15■□□□□ 0.82
CAPN1-222ENST00000532285 OR5J2Q8NH18 312 aa20.15■□□□□ 0.82
CAPN1-222ENST00000532285 TMEM171Q8WVE6 324 aa20.15■□□□□ 0.82
CAPN1-222ENST00000532285 IGFBPL1Q8WX77 278 aa20.15■□□□□ 0.82
CAPN1-222ENST00000532285 LZICQ8WZA0 190 aa20.15■□□□□ 0.82
CAPN1-222ENST00000532285 TPD52L3Q96J77 140 aa20.15■□□□□ 0.82
CAPN1-222ENST00000532285 RADILQ96JH8 1075 aa20.15■□□□□ 0.82
CAPN1-222ENST00000532285 ALKBH3Q96Q83 286 aaPredicted RBP20.15■□□□□ 0.82
CAPN1-222ENST00000532285 NOX1Q9Y5S8 564 aa20.15■□□□□ 0.82
CAPN1-222ENST00000532285 MAGED1Q9Y5V3 778 aaPredicted RBP20.15■□□□□ 0.82
CAPN1-222ENST00000532285 ABCD4O14678 606 aa20.14■□□□□ 0.81
CAPN1-222ENST00000532285 GSTA4O15217 222 aa20.14■□□□□ 0.81
CAPN1-222ENST00000532285 ARHGEF9O43307 516 aa20.14■□□□□ 0.81
CAPN1-222ENST00000532285 OR5F1O95221 314 aa20.14■□□□□ 0.81
CAPN1-222ENST00000532285 WNT11O96014 354 aa20.14■□□□□ 0.81
CAPN1-222ENST00000532285 OR1E2P47887 323 aa20.14■□□□□ 0.81
CAPN1-222ENST00000532285 ZNF74Q16587 644 aa20.14■□□□□ 0.81
CAPN1-222ENST00000532285 SHEQ5VZ18 495 aa20.14■□□□□ 0.81
CAPN1-222ENST00000532285 KLHL24Q6TFL4 600 aa20.14■□□□□ 0.81
CAPN1-222ENST00000532285 LINGO2Q7L985 606 aa20.14■□□□□ 0.81
CAPN1-222ENST00000532285 PXKQ7Z7A4 578 aa20.14■□□□□ 0.81
CAPN1-222ENST00000532285 GPR137CQ8N3F9 429 aa20.14■□□□□ 0.81
CAPN1-222ENST00000532285 PIK3C3Q8NEB9 887 aa20.14■□□□□ 0.81
CAPN1-222ENST00000532285 KBTBD8Q8NFY9 601 aa20.14■□□□□ 0.81
CAPN1-222ENST00000532285 OR1K1Q8NGR3 316 aa20.14■□□□□ 0.81
CAPN1-222ENST00000532285 OR2M2Q96R28 347 aa20.14■□□□□ 0.81
CAPN1-222ENST00000532285 PRSS27Q9BQR3 290 aa20.14■□□□□ 0.81
CAPN1-222ENST00000532285 TMUB1Q9BVT8 246 aa20.14■□□□□ 0.81
CAPN1-222ENST00000532285 ALG2Q9H553 416 aa20.14■□□□□ 0.81
CAPN1-222ENST00000532285 FKRPQ9H9S5 495 aa20.14■□□□□ 0.81
CAPN1-222ENST00000532285 NANSQ9NR45 359 aa20.14■□□□□ 0.81
CAPN1-222ENST00000532285 RIMS3Q9UJD0 308 aa20.14■□□□□ 0.81
CAPN1-222ENST00000532285 VPS13CQ709C8 3753 aa20.14■□□□□ 0.81
CAPN1-222ENST00000532285 ALPK2Q86TB3 2170 aa20.13■□□□□ 0.81
CAPN1-222ENST00000532285 RPL36A-HNRNPH2H7BZ11 118 aa20.13■□□□□ 0.81
CAPN1-222ENST00000532285 CXCR6O00574 342 aa20.13■□□□□ 0.81
CAPN1-222ENST00000532285 DYNC1I1O14576 645 aa20.13■□□□□ 0.81
CAPN1-222ENST00000532285 SHOX2O60902 331 aaPredicted RBP20.13■□□□□ 0.81
CAPN1-222ENST00000532285 OR6A2O95222 327 aa20.13■□□□□ 0.81
CAPN1-222ENST00000532285 CH25HO95992 272 aa20.13■□□□□ 0.81
CAPN1-222ENST00000532285 HLA-DOBP13765 273 aa20.13■□□□□ 0.81
CAPN1-222ENST00000532285 CD99P14209 185 aa20.13■□□□□ 0.81
CAPN1-222ENST00000532285 AHCYP23526 432 aa20.13■□□□□ 0.81
CAPN1-222ENST00000532285 RBM34P42696 430 aaKnown RBP20.13■□□□□ 0.81
CAPN1-222ENST00000532285 SH3BGRP55822 239 aaPredicted RBP20.13■□□□□ 0.81
CAPN1-222ENST00000532285 ROR2Q01974 943 aaKnown RBP20.13■□□□□ 0.81
CAPN1-222ENST00000532285 POU3F1Q03052 451 aaPredicted RBP20.13■□□□□ 0.81
CAPN1-222ENST00000532285 NEUROG1Q92886 237 aa20.13■□□□□ 0.81
CAPN1-222ENST00000532285 CXorf56Q9H5V9 222 aa20.13■□□□□ 0.81
CAPN1-222ENST00000532285 OBP2BQ9NPH6 170 aa20.13■□□□□ 0.81
CAPN1-222ENST00000532285 GMPR2Q9P2T1 348 aaKnown RBP20.13■□□□□ 0.81
CAPN1-222ENST00000532285 SHISA9B4DS77 424 aa20.12■□□□□ 0.81
CAPN1-222ENST00000532285 M0R1B8 84 aa20.12■□□□□ 0.81
CAPN1-222ENST00000532285 KPNA4O00629 521 aaPredicted RBP20.12■□□□□ 0.81
CAPN1-222ENST00000532285 HIST1H2ABP04908 130 aa20.12■□□□□ 0.81
CAPN1-222ENST00000532285 ADORA3P0DMS8 318 aa20.12■□□□□ 0.81
CAPN1-222ENST00000532285 THRBP10828 461 aa20.12■□□□□ 0.81
CAPN1-222ENST00000532285 PAX7P23759 505 aa20.12■□□□□ 0.81
CAPN1-222ENST00000532285 CD40P25942 277 aa20.12■□□□□ 0.81
CAPN1-222ENST00000532285 GSK3BP49841 420 aa20.12■□□□□ 0.81
CAPN1-222ENST00000532285 PSME3P61289 254 aa20.12■□□□□ 0.81
CAPN1-222ENST00000532285 SLC25A3Q00325 362 aa20.12■□□□□ 0.81
CAPN1-222ENST00000532285 PIN1Q13526 163 aaPredicted RBP20.12■□□□□ 0.81
CAPN1-222ENST00000532285 HIKESHIQ53FT3 197 aa20.12■□□□□ 0.81
CAPN1-222ENST00000532285 NHLRC1Q6VVB1 395 aa20.12■□□□□ 0.81
CAPN1-222ENST00000532285 HIST3H2AQ7L7L0 130 aa20.12■□□□□ 0.81
CAPN1-222ENST00000532285 TMEM123Q8N131 208 aa20.12■□□□□ 0.81
CAPN1-222ENST00000532285 HIST1H2ACQ93077 130 aa20.12■□□□□ 0.81
CAPN1-222ENST00000532285 LRR1Q96L50 414 aa20.12■□□□□ 0.81
CAPN1-222ENST00000532285 C1QTNF6Q9BXI9 259 aa20.12■□□□□ 0.81
CAPN1-222ENST00000532285 ABCD2Q9UBJ2 740 aa20.12■□□□□ 0.81
CAPN1-222ENST00000532285 ZNF229Q9UJW7 825 aa20.12■□□□□ 0.81
CAPN1-222ENST00000532285 LAMP3Q9UQV4 416 aa20.12■□□□□ 0.81
CAPN1-222ENST00000532285 ARL2BPQ9Y2Y0 163 aa20.12■□□□□ 0.81
CAPN1-222ENST00000532285 ZP4Q12836 540 aa20.11■□□□□ 0.81
CAPN1-222ENST00000532285 TBRG1Q3YBR2 411 aa20.11■□□□□ 0.81
CAPN1-222ENST00000532285 ANKRD16Q6P6B7 361 aa20.11■□□□□ 0.81
CAPN1-222ENST00000532285 PIGWQ7Z7B1 504 aa20.11■□□□□ 0.81
CAPN1-222ENST00000532285 NKAIN4Q8IVV8 208 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms