RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 MRGBPQ9NV56 204 aa6.21□□□□□ -1.42
ITGB1-218ENST00000528877 PARPBPQ9NWS1 579 aa6.21□□□□□ -1.42
ITGB1-218ENST00000528877 CCDC167Q9P0B6 97 aa6.21□□□□□ -1.42
ITGB1-218ENST00000528877 VAPAQ9P0L0 249 aa6.21□□□□□ -1.42
ITGB1-218ENST00000528877 KLHL14Q9P2G3 628 aa6.21□□□□□ -1.42
ITGB1-218ENST00000528877 TESQ9UGI8 421 aaKnown RBP6.21□□□□□ -1.42
ITGB1-218ENST00000528877 NOSIPQ9Y314 301 aaKnown RBP6.21□□□□□ -1.42
ITGB1-218ENST00000528877 ABCA2Q9BZC7 2435 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 PLCE1Q9P212 2302 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 PRORSD1PA6NEY8 169 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 OR6C65A6NJZ3 312 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 FAM171A2A8MVW0 826 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 NUDT19A8MXV4 375 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 C5orf58C9J3I9 102 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 OVOL3O00110 214 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 FMO6PO60774 539 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 MRPL33O75394 65 aaKnown RBP6.2□□□□□ -1.42
ITGB1-218ENST00000528877 VAMP5O95183 116 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 GKN3PP0CG01 181 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 HTR2AP28223 471 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 ADSLP30566 484 aaPredicted RBP6.2□□□□□ -1.42
ITGB1-218ENST00000528877 PTH2RP49190 550 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 OR2B6P58173 313 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 CDK6Q00534 326 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 EGR4Q05215 589 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 BSPH1Q075Z2 132 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 RBBP4Q09028 425 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 TSC22D1Q15714 1073 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 ETFDHQ16134 617 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 GABRA6Q16445 453 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 FXNQ16595 210 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 ZNF672Q499Z4 452 aaPredicted RBP6.2□□□□□ -1.42
ITGB1-218ENST00000528877 COQ5Q5HYK3 327 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 ZNF311Q5JNZ3 666 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 OTUD3Q5T2D3 398 aaPredicted RBP6.2□□□□□ -1.42
ITGB1-218ENST00000528877 C1orf140Q5VVS0 124 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 FAM91A1Q658Y4 838 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 CASP12Q6UXS9 341 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 DTX2Q86UW9 622 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 COMTD1Q86VU5 262 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 KRT73Q86Y46 540 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 CCDC103Q8IW40 242 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 ZIC4Q8N9L1 334 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 ADPRHL1Q8NDY3 354 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 OR9K2Q8NGE7 335 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 OR6S1Q8NH40 331 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 MFSD8Q8NHS3 518 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 TMEM171Q8WVE6 324 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 DNAJA4Q8WW22 397 aaPredicted RBP6.2□□□□□ -1.42
ITGB1-218ENST00000528877 AKAP1Q92667 903 aaKnown RBP eCLIP6.2□□□□□ -1.42
ITGB1-218ENST00000528877 FBXW5Q969U6 566 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 MUCL1Q96DR8 90 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 RADILQ96JH8 1075 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 C18orf12Q96KH6 178 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 ANKRD27Q96NW4 1050 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 MUS81Q96NY9 551 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 ZNF317Q96PQ6 595 aaPredicted RBP6.2□□□□□ -1.42
ITGB1-218ENST00000528877 PTDSS2Q9BVG9 487 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 SPATA5L1Q9BVQ7 753 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 ASB6Q9NWX5 421 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 NPAP1Q9NZP6 1156 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 LEF1Q9UJU2 399 aaPredicted RBP6.2□□□□□ -1.42
ITGB1-218ENST00000528877 RCE1Q9Y256 329 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 RASD1Q9Y272 281 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 SLC25A15Q9Y619 301 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 ARID1AO14497 2285 aa6.2□□□□□ -1.42
ITGB1-218ENST00000528877 IGKV1D-42A0A075B6H8 117 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 A0A0B4J2E0 115 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 LOC102725191A0A1B0GVB3 256 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 A0A1B0GX12 115 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 DPRXA6NFQ7 191 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 SHISA9B4DS77 424 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 SMAD7O15105 426 aaKnown RBP6.19□□□□□ -1.42
ITGB1-218ENST00000528877 PLAUP00749 431 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 C8BP07358 591 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 PNMTP11086 282 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 NCF2P19878 526 aaPredicted RBP6.19□□□□□ -1.42
ITGB1-218ENST00000528877 PAX7P23759 505 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 SLC6A2P23975 617 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 MPGP29372 298 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 SH3BGRP55822 239 aaPredicted RBP6.19□□□□□ -1.42
ITGB1-218ENST00000528877 RPS4XP62701 263 aaKnown RBP6.19□□□□□ -1.42
ITGB1-218ENST00000528877 CEACAM7Q14002 265 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 SCARB2Q14108 478 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 OR7A5Q15622 319 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 STK11Q15831 433 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 PGGHGQ32M88 737 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 TRMT5Q32P41 509 aaKnown RBP6.19□□□□□ -1.42
ITGB1-218ENST00000528877 AGKQ53H12 422 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 RUNDC3AQ59EK9 446 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 FAM69AQ5T7M9 428 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 TMEM108Q6UXF1 575 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 ABHD12BQ7Z5M8 362 aaPredicted RBP6.19□□□□□ -1.42
ITGB1-218ENST00000528877 DHDDSQ86SQ9 333 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 PTOV1Q86YD1 416 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 SLC30A8Q8IWU4 369 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 CADM2Q8N3J6 435 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 POMGNT2Q8NAT1 580 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 C11orf65Q8NCR3 313 aa6.19□□□□□ -1.42
ITGB1-218ENST00000528877 HIPK4Q8NE63 616 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms