RNA–Protein interactions for RNA: ENST00000528455.5

CD44-228, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 687 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-228ENST00000528455 OR14I1A6ND48 311 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 UNC119BA6NIH7 251 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 EFCAB9A8MZ26 197 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 SULT2B1O00204 365 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 AQP7O14520 342 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 TFECO14948 347 aaPredicted RBP6.63□□□□□ -1.35
CD44-228ENST00000528455 PSPNO60542 156 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 DNAJC13O75165 2243 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 OR7A10O76100 309 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 AHSA1O95433 338 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 PMS2P2O95744 297 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 CH25HO95992 272 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 ASAH2BP0C7U1 165 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 TFPIP10646 304 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 OSMP13725 252 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 BMP7P18075 431 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 CDH2P19022 906 aaPredicted RBP6.63□□□□□ -1.35
CD44-228ENST00000528455 CCNA2P20248 432 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 MAKP20794 623 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 IL11P20809 199 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 IDUAP35475 653 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 RFC3P40938 356 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 ECI1P42126 302 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 LHX2P50458 406 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 AGFG1P52594 562 aaKnown RBP6.63□□□□□ -1.35
CD44-228ENST00000528455 PRPS1P60891 318 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 ESRRGP62508 458 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 CSNK2A1P68400 391 aaPredicted RBP6.63□□□□□ -1.35
CD44-228ENST00000528455 SLC35A1P78382 337 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 H3F3AP84243 136 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 LTBQ06643 244 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 CRYZQ08257 329 aaKnown RBP6.63□□□□□ -1.35
CD44-228ENST00000528455 ZP4Q12836 540 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 FOXF1Q12946 379 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 FOXD4Q12950 439 aaPredicted RBP6.63□□□□□ -1.35
CD44-228ENST00000528455 SF3B4Q15427 424 aaKnown RBP eCLIP6.63□□□□□ -1.35
CD44-228ENST00000528455 ZNF74Q16587 644 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 ZNF239Q16600 458 aaKnown RBP6.63□□□□□ -1.35
CD44-228ENST00000528455 NADK2Q4G0N4 442 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 SYT14P1Q58G82 188 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 CMPK2Q5EBM0 449 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 PDSS1Q5T2R2 415 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 C1QL3Q5VWW1 255 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 RAET1LQ5VY80 246 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 RPL13AP3Q6NVV1 102 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 TRILQ7L0X0 811 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 MAMDC2Q7Z304 686 aaPredicted RBP6.63□□□□□ -1.35
CD44-228ENST00000528455 OAFQ86UD1 273 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 EPHX4Q8IUS5 362 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 SIAH3Q8IW03 269 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 HS3ST5Q8IZT8 346 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 GALNT4Q8N4A0 578 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 CLDN22Q8N7P3 220 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 Q8NA96 180 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 OR5M1Q8NGP8 315 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 FAR1Q8WVX9 515 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 MIB2Q96AX9 1013 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 KIRREL1Q96J84 757 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 ARL5BQ96KC2 179 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 SFXN2Q96NB2 322 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 TNFRSF13CQ96RJ3 184 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 JMJD8Q96S16 334 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 TIMP4Q99727 224 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 GPA33Q99795 319 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 PTDSS2Q9BVG9 487 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 TAPBPLQ9BX59 468 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 FKRPQ9H9S5 495 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 FANCFQ9NPI8 374 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 PAPOLBQ9NRJ5 636 aaKnown RBP6.63□□□□□ -1.35
CD44-228ENST00000528455 C20orf141Q9NUB4 165 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 MRPL39Q9NYK5 338 aaKnown RBP6.63□□□□□ -1.35
CD44-228ENST00000528455 TMEFF2Q9UIK5 374 aaPredicted RBP6.63□□□□□ -1.35
CD44-228ENST00000528455 SIGLEC7Q9Y286 467 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 B3GALT5Q9Y2C3 310 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 LRRC42Q9Y546 428 aa6.63□□□□□ -1.35
CD44-228ENST00000528455 TRAV20A0A0B4J274 112 aa6.62□□□□□ -1.35
CD44-228ENST00000528455 A0A0J9YW62 118 aa6.62□□□□□ -1.35
CD44-228ENST00000528455 ZC3H12DA2A288 527 aaKnown RBP6.62□□□□□ -1.35
CD44-228ENST00000528455 LIPT2A6NK58 231 aa6.62□□□□□ -1.35
CD44-228ENST00000528455 ENO4A6NNW6 628 aa6.62□□□□□ -1.35
CD44-228ENST00000528455 FAM166BA8MTA8 275 aa6.62□□□□□ -1.35
CD44-228ENST00000528455 AHRRA9YTQ3 701 aa6.62□□□□□ -1.35
CD44-228ENST00000528455 FTCDNL1E5RQL4 147 aa6.62□□□□□ -1.35
CD44-228ENST00000528455 H0YAE9 185 aa6.62□□□□□ -1.35
CD44-228ENST00000528455 H3BML4 177 aa6.62□□□□□ -1.35
CD44-228ENST00000528455 DLGAP1O14490 977 aa6.62□□□□□ -1.35
CD44-228ENST00000528455 CDC42EP2O14613 210 aa6.62□□□□□ -1.35
CD44-228ENST00000528455 EI24O14681 340 aa6.62□□□□□ -1.35
CD44-228ENST00000528455 SLC16A6O15403 523 aa6.62□□□□□ -1.35
CD44-228ENST00000528455 SEC14L5O43304 696 aa6.62□□□□□ -1.35
CD44-228ENST00000528455 IDH3BO43837 385 aa6.62□□□□□ -1.35
CD44-228ENST00000528455 VAMP5O95183 116 aa6.62□□□□□ -1.35
CD44-228ENST00000528455 BGLAPP02818 100 aa6.62□□□□□ -1.35
CD44-228ENST00000528455 HOXD4P09016 255 aaPredicted RBP6.62□□□□□ -1.35
CD44-228ENST00000528455 SAGP10523 405 aaPredicted RBP6.62□□□□□ -1.35
CD44-228ENST00000528455 POU2F1P14859 743 aa6.62□□□□□ -1.35
CD44-228ENST00000528455 ZNF708P17019 499 aa6.62□□□□□ -1.35
CD44-228ENST00000528455 JUNBP17275 347 aaPredicted RBP6.62□□□□□ -1.35
CD44-228ENST00000528455 PEX2P28328 305 aa6.62□□□□□ -1.35
CD44-228ENST00000528455 RPS5P46782 204 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms