RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 BIVMQ86UB2 503 aa28.93■■■□□ 2.22
SSSCA1-205ENST00000527920 OR1K1Q8NGR3 316 aa28.93■■■□□ 2.22
SSSCA1-205ENST00000527920 RP9Q8TA86 221 aaKnown RBP28.93■■■□□ 2.22
SSSCA1-205ENST00000527920 VANGL1Q8TAA9 524 aaPredicted RBP28.93■■■□□ 2.22
SSSCA1-205ENST00000527920 PROX1Q92786 737 aa28.93■■■□□ 2.22
SSSCA1-205ENST00000527920 SLC19A3Q9BZV2 496 aa28.93■■■□□ 2.22
SSSCA1-205ENST00000527920 ARMCX1Q9P291 453 aa28.93■■■□□ 2.22
SSSCA1-205ENST00000527920 BAG5Q9UL15 447 aa28.93■■■□□ 2.22
SSSCA1-205ENST00000527920 AP3M1Q9Y2T2 418 aa28.93■■■□□ 2.22
SSSCA1-205ENST00000527920 CPSF4LA6NMK7 179 aaKnown RBP28.92■■■□□ 2.22
SSSCA1-205ENST00000527920 MS4A18H0YCH9 400 aa28.92■■■□□ 2.22
SSSCA1-205ENST00000527920 M0R1B8 84 aa28.92■■■□□ 2.22
SSSCA1-205ENST00000527920 IFNA14P01570 189 aa28.92■■■□□ 2.22
SSSCA1-205ENST00000527920 MS4A18Q3C1V0 323 aa28.92■■■□□ 2.22
SSSCA1-205ENST00000527920 HMBOX1Q6NT76 420 aa28.92■■■□□ 2.22
SSSCA1-205ENST00000527920 LINGO2Q7L985 606 aa28.92■■■□□ 2.22
SSSCA1-205ENST00000527920 RBM45Q8IUH3 476 aaKnown RBP28.92■■■□□ 2.22
SSSCA1-205ENST00000527920 UEVLDQ8IX04 471 aa28.92■■■□□ 2.22
SSSCA1-205ENST00000527920 PIAS4Q8N2W9 510 aaPredicted RBP28.92■■■□□ 2.22
SSSCA1-205ENST00000527920 Q96MF0 132 aa28.92■■■□□ 2.22
SSSCA1-205ENST00000527920 MOGAT1Q96PD6 335 aa28.92■■■□□ 2.22
SSSCA1-205ENST00000527920 ZNF426Q9BUY5 554 aa28.92■■■□□ 2.22
SSSCA1-205ENST00000527920 FAM220BPB1ANY3 271 aa28.91■■■□□ 2.22
SSSCA1-205ENST00000527920 CCDC22O60826 627 aa28.91■■■□□ 2.22
SSSCA1-205ENST00000527920 THY1P04216 161 aa28.91■■■□□ 2.22
SSSCA1-205ENST00000527920 INHBBP09529 407 aa28.91■■■□□ 2.22
SSSCA1-205ENST00000527920 HOXB1P14653 301 aaPredicted RBP28.91■■■□□ 2.22
SSSCA1-205ENST00000527920 CBLP22681 906 aa28.91■■■□□ 2.22
SSSCA1-205ENST00000527920 ATP5J2P56134 94 aa28.91■■■□□ 2.22
SSSCA1-205ENST00000527920 PUDPQ08623 228 aa28.91■■■□□ 2.22
SSSCA1-205ENST00000527920 TBRG1Q3YBR2 411 aa28.91■■■□□ 2.22
SSSCA1-205ENST00000527920 SLC22A25Q6T423 547 aa28.91■■■□□ 2.22
SSSCA1-205ENST00000527920 ARPINQ7Z6K5 226 aa28.91■■■□□ 2.22
SSSCA1-205ENST00000527920 TMEM123Q8N131 208 aa28.91■■■□□ 2.22
SSSCA1-205ENST00000527920 DEPDC4Q8N2C3 294 aa28.91■■■□□ 2.22
SSSCA1-205ENST00000527920 PIK3C3Q8NEB9 887 aa28.91■■■□□ 2.22
SSSCA1-205ENST00000527920 TRMT61AQ96FX7 289 aaKnown RBP28.91■■■□□ 2.22
SSSCA1-205ENST00000527920 COX4I2Q96KJ9 171 aa28.91■■■□□ 2.22
SSSCA1-205ENST00000527920 OR2M2Q96R28 347 aa28.91■■■□□ 2.22
SSSCA1-205ENST00000527920 BDH2Q9BUT1 245 aa28.91■■■□□ 2.22
SSSCA1-205ENST00000527920 TRAF4Q9BUZ4 470 aaPredicted RBP28.91■■■□□ 2.22
SSSCA1-205ENST00000527920 MOV10Q9HCE1 1003 aaKnown RBP28.91■■■□□ 2.22
SSSCA1-205ENST00000527920 NOX1Q9Y5S8 564 aa28.91■■■□□ 2.22
SSSCA1-205ENST00000527920 ZFHX3Q15911 3703 aa28.91■■■□□ 2.22
SSSCA1-205ENST00000527920 ARPC4-TTLL3A0A0A6YYG9 625 aa28.9■■■□□ 2.22
SSSCA1-205ENST00000527920 HPRP00739 348 aa28.9■■■□□ 2.22
SSSCA1-205ENST00000527920 CDH2P19022 906 aaPredicted RBP28.9■■■□□ 2.22
SSSCA1-205ENST00000527920 ROR2Q01974 943 aaKnown RBP28.9■■■□□ 2.22
SSSCA1-205ENST00000527920 PMS2P3Q13401 168 aa28.9■■■□□ 2.22
SSSCA1-205ENST00000527920 ETFDHQ16134 617 aa28.9■■■□□ 2.22
SSSCA1-205ENST00000527920 HIKESHIQ53FT3 197 aa28.9■■■□□ 2.22
SSSCA1-205ENST00000527920 ANKRD16Q6P6B7 361 aa28.9■■■□□ 2.22
SSSCA1-205ENST00000527920 WDR88Q6ZMY6 472 aa28.9■■■□□ 2.22
SSSCA1-205ENST00000527920 TSPYL5Q86VY4 417 aaPredicted RBP28.9■■■□□ 2.22
SSSCA1-205ENST00000527920 BCL2L2Q92843 193 aaPredicted RBP28.9■■■□□ 2.22
SSSCA1-205ENST00000527920 RCN3Q96D15 328 aa28.9■■■□□ 2.22
SSSCA1-205ENST00000527920 POLR2J2Q9GZM3 115 aaKnown RBP28.9■■■□□ 2.22
SSSCA1-205ENST00000527920 POLR2J3Q9H1A7 115 aaKnown RBP28.9■■■□□ 2.22
SSSCA1-205ENST00000527920 IL1RL1Q01638 556 aa28.89■■■□□ 2.22
SSSCA1-205ENST00000527920 SPOCK1Q08629 439 aa28.89■■■□□ 2.22
SSSCA1-205ENST00000527920 NHLRC1Q6VVB1 395 aa28.89■■■□□ 2.22
SSSCA1-205ENST00000527920 PXKQ7Z7A4 578 aa28.89■■■□□ 2.22
SSSCA1-205ENST00000527920 GPR137CQ8N3F9 429 aa28.89■■■□□ 2.22
SSSCA1-205ENST00000527920 C10orf53Q8N6V4 93 aa28.89■■■□□ 2.22
SSSCA1-205ENST00000527920 DHRS9Q9BPW9 319 aa28.89■■■□□ 2.22
SSSCA1-205ENST00000527920 ALG2Q9H553 416 aa28.89■■■□□ 2.22
SSSCA1-205ENST00000527920 FKRPQ9H9S5 495 aa28.89■■■□□ 2.22
SSSCA1-205ENST00000527920 SLC7A7Q9UM01 511 aa28.89■■■□□ 2.22
SSSCA1-205ENST00000527920 NF1P21359 2839 aa28.89■■■□□ 2.22
SSSCA1-205ENST00000527920 PLPP3O14495 311 aa28.88■■■□□ 2.21
SSSCA1-205ENST00000527920 CD8AP01732 235 aa28.88■■■□□ 2.21
SSSCA1-205ENST00000527920 AGAP6Q5VW22 663 aa28.88■■■□□ 2.21
SSSCA1-205ENST00000527920 TTC33Q6PID6 262 aaPredicted RBP28.88■■■□□ 2.21
SSSCA1-205ENST00000527920 CARM1Q86X55 608 aa28.88■■■□□ 2.21
SSSCA1-205ENST00000527920 OR2T12Q8NG77 320 aa28.88■■■□□ 2.21
SSSCA1-205ENST00000527920 OR5J2Q8NH18 312 aa28.88■■■□□ 2.21
SSSCA1-205ENST00000527920 GTPBP3Q969Y2 492 aaKnown RBP28.88■■■□□ 2.21
SSSCA1-205ENST00000527920 LRR1Q96L50 414 aa28.88■■■□□ 2.21
SSSCA1-205ENST00000527920 C1QTNF6Q9BXI9 259 aa28.88■■■□□ 2.21
SSSCA1-205ENST00000527920 POU2F3Q9UKI9 436 aa28.88■■■□□ 2.21
SSSCA1-205ENST00000527920 E7EQL1 145 aa28.87■■■□□ 2.21
SSSCA1-205ENST00000527920 UBE2NP61088 152 aaKnown RBP28.87■■■□□ 2.21
SSSCA1-205ENST00000527920 POU3F1Q03052 451 aaPredicted RBP28.87■■■□□ 2.21
SSSCA1-205ENST00000527920 ZNF74Q16587 644 aa28.87■■■□□ 2.21
SSSCA1-205ENST00000527920 C3orf36Q3SXR2 165 aa28.87■■■□□ 2.21
SSSCA1-205ENST00000527920 ZNF544Q6NX49 715 aa28.87■■■□□ 2.21
SSSCA1-205ENST00000527920 POU5F2Q8N7G0 328 aa28.87■■■□□ 2.21
SSSCA1-205ENST00000527920 FAM169BQ8N8A8 192 aa28.87■■■□□ 2.21
SSSCA1-205ENST00000527920 NELFAQ9H3P2 528 aa28.87■■■□□ 2.21
SSSCA1-205ENST00000527920 GPR35Q9HC97 309 aa28.87■■■□□ 2.21
SSSCA1-205ENST00000527920 USP22Q9UPT9 525 aa28.87■■■□□ 2.21
SSSCA1-205ENST00000527920 SH3GLB1Q9Y371 365 aa28.87■■■□□ 2.21
SSSCA1-205ENST00000527920 FAM171A2A8MVW0 826 aa28.86■■■□□ 2.21
SSSCA1-205ENST00000527920 LRRN3E7EW58 273 aa28.86■■■□□ 2.21
SSSCA1-205ENST00000527920 HLA-DOBP13765 273 aa28.86■■■□□ 2.21
SSSCA1-205ENST00000527920 PTNP21246 168 aa28.86■■■□□ 2.21
SSSCA1-205ENST00000527920 CRNNQ9UBG3 495 aaPredicted RBP28.86■■■□□ 2.21
SSSCA1-205ENST00000527920 COX4I1P13073 169 aa28.85■■■□□ 2.21
SSSCA1-205ENST00000527920 KDELR2P33947 212 aa28.85■■■□□ 2.21
SSSCA1-205ENST00000527920 TTKP33981 857 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms