RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 FBXW5Q969U6 566 aa23.12■■□□□ 1.29
TSPAN4-217ENST00000527644 RADILQ96JH8 1075 aa23.12■■□□□ 1.29
TSPAN4-217ENST00000527644 ZNF426Q9BUY5 554 aa23.12■■□□□ 1.29
TSPAN4-217ENST00000527644 MGAT4BQ9UQ53 548 aa23.12■■□□□ 1.29
TSPAN4-217ENST00000527644 MAGED1Q9Y5V3 778 aaPredicted RBP23.12■■□□□ 1.29
TSPAN4-217ENST00000527644 ARID1AO14497 2285 aa23.12■■□□□ 1.29
TSPAN4-217ENST00000527644 LRRN3E7EW58 273 aa23.11■■□□□ 1.29
TSPAN4-217ENST00000527644 PLPP3O14495 311 aa23.11■■□□□ 1.29
TSPAN4-217ENST00000527644 NDUFAB1O14561 156 aa23.11■■□□□ 1.29
TSPAN4-217ENST00000527644 ARHGEF9O43307 516 aa23.11■■□□□ 1.29
TSPAN4-217ENST00000527644 TRAF3IP2O43734 574 aaPredicted RBP23.11■■□□□ 1.29
TSPAN4-217ENST00000527644 HPRP00739 348 aa23.11■■□□□ 1.29
TSPAN4-217ENST00000527644 CD99P14209 185 aa23.11■■□□□ 1.29
TSPAN4-217ENST00000527644 CDH2P19022 906 aaPredicted RBP23.11■■□□□ 1.29
TSPAN4-217ENST00000527644 TNFRSF1BP20333 461 aa23.11■■□□□ 1.29
TSPAN4-217ENST00000527644 PTAFRP25105 342 aa23.11■■□□□ 1.29
TSPAN4-217ENST00000527644 NUDT2P50583 147 aa23.11■■□□□ 1.29
TSPAN4-217ENST00000527644 ZNF83P51522 516 aa23.11■■□□□ 1.29
TSPAN4-217ENST00000527644 PRPS1P60891 318 aa23.11■■□□□ 1.29
TSPAN4-217ENST00000527644 PUDPQ08623 228 aa23.11■■□□□ 1.29
TSPAN4-217ENST00000527644 KBTBD8Q8NFY9 601 aa23.11■■□□□ 1.29
TSPAN4-217ENST00000527644 OR5J2Q8NH18 312 aa23.11■■□□□ 1.29
TSPAN4-217ENST00000527644 ALKBH3Q96Q83 286 aaPredicted RBP23.11■■□□□ 1.29
TSPAN4-217ENST00000527644 NOX1Q9Y5S8 564 aa23.11■■□□□ 1.29
TSPAN4-217ENST00000527644 ABCD4O14678 606 aa23.1■■□□□ 1.29
TSPAN4-217ENST00000527644 WNT11O96014 354 aa23.1■■□□□ 1.29
TSPAN4-217ENST00000527644 PRDX6P30041 224 aa23.1■■□□□ 1.29
TSPAN4-217ENST00000527644 SLC7A2P52569 658 aa23.1■■□□□ 1.29
TSPAN4-217ENST00000527644 GYS2P54840 703 aa23.1■■□□□ 1.29
TSPAN4-217ENST00000527644 TAS2R41P59536 307 aa23.1■■□□□ 1.29
TSPAN4-217ENST00000527644 GNGT1P63211 74 aa23.1■■□□□ 1.29
TSPAN4-217ENST00000527644 SELENOWP63302 87 aa23.1■■□□□ 1.29
TSPAN4-217ENST00000527644 ZNF74Q16587 644 aa23.1■■□□□ 1.29
TSPAN4-217ENST00000527644 HMBOX1Q6NT76 420 aa23.1■■□□□ 1.29
TSPAN4-217ENST00000527644 KLHL24Q6TFL4 600 aa23.1■■□□□ 1.29
TSPAN4-217ENST00000527644 DEF8Q6ZN54 512 aa23.1■■□□□ 1.29
TSPAN4-217ENST00000527644 LINGO2Q7L985 606 aa23.1■■□□□ 1.29
TSPAN4-217ENST00000527644 PXKQ7Z7A4 578 aa23.1■■□□□ 1.29
TSPAN4-217ENST00000527644 OR1K1Q8NGR3 316 aa23.1■■□□□ 1.29
TSPAN4-217ENST00000527644 NEUROG1Q92886 237 aa23.1■■□□□ 1.29
TSPAN4-217ENST00000527644 PRSS27Q9BQR3 290 aa23.1■■□□□ 1.29
TSPAN4-217ENST00000527644 CXorf56Q9H5V9 222 aa23.1■■□□□ 1.29
TSPAN4-217ENST00000527644 OBP2BQ9NPH6 170 aa23.1■■□□□ 1.29
TSPAN4-217ENST00000527644 SHISA9B4DS77 424 aa23.09■■□□□ 1.29
TSPAN4-217ENST00000527644 RPL36A-HNRNPH2H7BZ11 118 aa23.09■■□□□ 1.29
TSPAN4-217ENST00000527644 NME4O00746 187 aa23.09■■□□□ 1.29
TSPAN4-217ENST00000527644 OR5F1O95221 314 aa23.09■■□□□ 1.29
TSPAN4-217ENST00000527644 CH25HO95992 272 aa23.09■■□□□ 1.29
TSPAN4-217ENST00000527644 HLA-DOBP13765 273 aa23.09■■□□□ 1.29
TSPAN4-217ENST00000527644 CD40P25942 277 aa23.09■■□□□ 1.29
TSPAN4-217ENST00000527644 OR1E2P47887 323 aa23.09■■□□□ 1.29
TSPAN4-217ENST00000527644 ROR2Q01974 943 aaKnown RBP23.09■■□□□ 1.29
TSPAN4-217ENST00000527644 FOXD4Q12950 439 aaPredicted RBP23.09■■□□□ 1.29
TSPAN4-217ENST00000527644 PIK3C3Q8NEB9 887 aa23.09■■□□□ 1.29
TSPAN4-217ENST00000527644 WFDC11Q8NEX6 87 aa23.09■■□□□ 1.29
TSPAN4-217ENST00000527644 LZICQ8WZA0 190 aa23.09■■□□□ 1.29
TSPAN4-217ENST00000527644 TPD52L3Q96J77 140 aa23.09■■□□□ 1.29
TSPAN4-217ENST00000527644 OR2M2Q96R28 347 aa23.09■■□□□ 1.29
TSPAN4-217ENST00000527644 C1QTNF6Q9BXI9 259 aa23.09■■□□□ 1.29
TSPAN4-217ENST00000527644 GSX2Q9BZM3 304 aa23.09■■□□□ 1.29
TSPAN4-217ENST00000527644 FKRPQ9H9S5 495 aa23.09■■□□□ 1.29
TSPAN4-217ENST00000527644 NANSQ9NR45 359 aa23.09■■□□□ 1.29
TSPAN4-217ENST00000527644 M0R1B8 84 aa23.08■■□□□ 1.29
TSPAN4-217ENST00000527644 OR6A2O95222 327 aa23.08■■□□□ 1.29
TSPAN4-217ENST00000527644 PAX1P15863 534 aa23.08■■□□□ 1.29
TSPAN4-217ENST00000527644 AHCYP23526 432 aa23.08■■□□□ 1.29
TSPAN4-217ENST00000527644 PAX7P23759 505 aa23.08■■□□□ 1.29
TSPAN4-217ENST00000527644 SH3BGRP55822 239 aaPredicted RBP23.08■■□□□ 1.29
TSPAN4-217ENST00000527644 SLC25A3Q00325 362 aa23.08■■□□□ 1.29
TSPAN4-217ENST00000527644 POU3F1Q03052 451 aaPredicted RBP23.08■■□□□ 1.29
TSPAN4-217ENST00000527644 HIKESHIQ53FT3 197 aa23.08■■□□□ 1.29
TSPAN4-217ENST00000527644 NHLRC1Q6VVB1 395 aa23.08■■□□□ 1.29
TSPAN4-217ENST00000527644 KRTAP1-3Q8IUG1 177 aa23.08■■□□□ 1.29
TSPAN4-217ENST00000527644 TMEM123Q8N131 208 aa23.08■■□□□ 1.29
TSPAN4-217ENST00000527644 GPR137CQ8N3F9 429 aa23.08■■□□□ 1.29
TSPAN4-217ENST00000527644 SMAP2Q8WU79 429 aaPredicted RBP23.08■■□□□ 1.29
TSPAN4-217ENST00000527644 ALG2Q9H553 416 aa23.08■■□□□ 1.29
TSPAN4-217ENST00000527644 CISD1Q9NZ45 108 aaKnown RBP23.08■■□□□ 1.29
TSPAN4-217ENST00000527644 GMPR2Q9P2T1 348 aaKnown RBP23.08■■□□□ 1.29
TSPAN4-217ENST00000527644 RIMS3Q9UJD0 308 aa23.08■■□□□ 1.29
TSPAN4-217ENST00000527644 ZNF229Q9UJW7 825 aa23.08■■□□□ 1.29
TSPAN4-217ENST00000527644 LAMP3Q9UQV4 416 aa23.08■■□□□ 1.29
TSPAN4-217ENST00000527644 VPS13CQ709C8 3753 aa23.07■■□□□ 1.28
TSPAN4-217ENST00000527644 CXCR6O00574 342 aa23.07■■□□□ 1.28
TSPAN4-217ENST00000527644 KPNA4O00629 521 aaPredicted RBP23.07■■□□□ 1.28
TSPAN4-217ENST00000527644 GSTA4O15217 222 aa23.07■■□□□ 1.28
TSPAN4-217ENST00000527644 SHOX2O60902 331 aaPredicted RBP23.07■■□□□ 1.28
TSPAN4-217ENST00000527644 DANCRP0C864 163 aa23.07■■□□□ 1.28
TSPAN4-217ENST00000527644 ADORA3P0DMS8 318 aa23.07■■□□□ 1.28
TSPAN4-217ENST00000527644 THRBP10828 461 aa23.07■■□□□ 1.28
TSPAN4-217ENST00000527644 RBM34P42696 430 aaKnown RBP23.07■■□□□ 1.28
TSPAN4-217ENST00000527644 PIN1Q13526 163 aaPredicted RBP23.07■■□□□ 1.28
TSPAN4-217ENST00000527644 TBRG1Q3YBR2 411 aa23.07■■□□□ 1.28
TSPAN4-217ENST00000527644 ANKRD16Q6P6B7 361 aa23.07■■□□□ 1.28
TSPAN4-217ENST00000527644 PRSS57Q6UWY2 283 aa23.07■■□□□ 1.28
TSPAN4-217ENST00000527644 PIAS4Q8N2W9 510 aaPredicted RBP23.07■■□□□ 1.28
TSPAN4-217ENST00000527644 MAGEE2Q8TD90 523 aaPredicted RBP23.07■■□□□ 1.28
TSPAN4-217ENST00000527644 BCL2L2Q92843 193 aaPredicted RBP23.07■■□□□ 1.28
TSPAN4-217ENST00000527644 PERPQ96FX8 193 aa23.07■■□□□ 1.28
TSPAN4-217ENST00000527644 LRR1Q96L50 414 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms