RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 TMEM74BQ9NUR3 256 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 C14orf105Q9NVL8 296 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 TAS2R5Q9NYW4 299 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 PCDHGA5Q9Y5G8 931 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 MDC1Q14676 2089 aaKnown RBP11.45□□□□□ -0.58
CAPN1-208ENST00000527323 DMXL1Q9Y485 3027 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 GPR89AB7ZAQ6 455 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 H3BSH0 61 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 IMPA2O14732 288 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 NDUFB2O95178 105 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 GPR89BP0CG08 455 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 GABRG2P18507 467 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 ZP3P21754 424 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 CDK2P24941 298 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 P2RX1P51575 399 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 ART1P52961 327 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 MAZP56270 477 aaKnown RBP11.45□□□□□ -0.58
CAPN1-208ENST00000527323 C1orf61Q13536 156 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 ELFN2Q5R3F8 820 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 USP53Q70EK8 1073 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 SHISA5Q8N114 240 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 PATE1Q8WXA2 126 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 SERINC2Q96SA4 455 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 AIFM2Q9BRQ8 373 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 SEMA4CQ9C0C4 833 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 MS4A7Q9GZW8 240 aaPredicted RBP11.45□□□□□ -0.58
CAPN1-208ENST00000527323 SLITRK2Q9H156 845 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 PLEKHA1Q9HB21 404 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 DAPP1Q9UN19 280 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 ZNF281Q9Y2X9 895 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 KCNMB2Q9Y691 235 aa11.45□□□□□ -0.58
CAPN1-208ENST00000527323 TUBAL3A6NHL2 446 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 MCIDASD6RGH6 385 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 RP2O75695 350 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 NGFRP08138 427 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 POU2F2P09086 479 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 CTRB1P17538 263 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 DPP4P27487 766 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 PTH2RP49190 550 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 EPHA4P54764 986 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 ZNF776Q68DI1 518 aaPredicted RBP11.44□□□□□ -0.58
CAPN1-208ENST00000527323 CTRB2Q6GPI1 263 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 FBXO42Q6P3S6 717 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 PAQR7Q86WK9 346 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 SPICQ8N5J4 248 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 ZNRF4Q8WWF5 429 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 SRMSQ9H3Y6 488 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 TMEM138Q9NPI0 162 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 DUSP22Q9NRW4 184 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 RABL2AQ9UBK7 228 aaPredicted RBP11.44□□□□□ -0.58
CAPN1-208ENST00000527323 OR5V1Q9UGF6 321 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 RABL2BQ9UNT1 228 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 SNRNP200O75643 2136 aaKnown RBP11.44□□□□□ -0.58
CAPN1-208ENST00000527323 A0A0B4J2E0 115 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 A0A1B0GX12 115 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 GPRIN2O60269 458 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 RPS4Y1P22090 263 aaKnown RBP11.44□□□□□ -0.58
CAPN1-208ENST00000527323 S100A11P31949 105 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 BAMBIQ13145 260 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 HLXQ14774 488 aaPredicted RBP11.44□□□□□ -0.58
CAPN1-208ENST00000527323 OR10G6Q8NH81 332 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 ZDHHC1Q8WTX9 485 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 THEM6Q8WUY1 208 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 KLHL15Q96M94 604 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 CMTM3Q96MX0 182 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 OR1F2PQ96R84 312 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 GFI1Q99684 422 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 SARGQ9BW04 601 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 SLC17A9Q9BYT1 436 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 TSPAN10Q9H1Z9 355 aaPredicted RBP11.44□□□□□ -0.58
CAPN1-208ENST00000527323 TCEAL2Q9H3H9 227 aaPredicted RBP11.44□□□□□ -0.58
CAPN1-208ENST00000527323 FOXJ3Q9UPW0 622 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 UNC13CQ8NB66 2214 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 ANKRD20A5PA0PJZ0 165 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 TRIM77I1YAP6 450 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 ACOT7O00154 380 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 BET1O15155 118 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 FGF17O60258 216 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 DIO1P49895 249 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 SEC61A1P61619 476 aaKnown RBP11.44□□□□□ -0.58
CAPN1-208ENST00000527323 TDGQ13569 410 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 CBFBQ13951 182 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 ZMYND11Q15326 602 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 C11orf88Q6PI97 169 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 UNQ9370/PRO34162Q6UXP9 181 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 REG4Q9BYZ8 158 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 FKRPQ9H9S5 495 aa11.44□□□□□ -0.58
CAPN1-208ENST00000527323 PTPRZ1P23471 2315 aaPredicted RBP11.43□□□□□ -0.58
CAPN1-208ENST00000527323 MFSD2BA6NFX1 497 aa11.43□□□□□ -0.58
CAPN1-208ENST00000527323 URADA6NGE7 173 aa11.43□□□□□ -0.58
CAPN1-208ENST00000527323 P2RX6O15547 441 aa11.43□□□□□ -0.58
CAPN1-208ENST00000527323 ZNF749O43361 778 aa11.43□□□□□ -0.58
CAPN1-208ENST00000527323 SULT1B1O43704 296 aa11.43□□□□□ -0.58
CAPN1-208ENST00000527323 ZFPL1O95159 310 aa11.43□□□□□ -0.58
CAPN1-208ENST00000527323 EML2O95834 649 aa11.43□□□□□ -0.58
CAPN1-208ENST00000527323 LPLP06858 475 aa11.43□□□□□ -0.58
CAPN1-208ENST00000527323 EMDP50402 254 aa11.43□□□□□ -0.58
CAPN1-208ENST00000527323 UBE2MP61081 183 aaKnown RBP11.43□□□□□ -0.58
CAPN1-208ENST00000527323 RPS15P62841 145 aaKnown RBP11.43□□□□□ -0.58
CAPN1-208ENST00000527323 RIPPLY1Q0D2K3 151 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms