RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.68□□□□□ -0.38
NXF1-204ENST00000527064 HTR3EA5X5Y0 456 aa12.68□□□□□ -0.38
NXF1-204ENST00000527064 ENO4A6NNW6 628 aa12.68□□□□□ -0.38
NXF1-204ENST00000527064 B2RBV5 119 aa12.68□□□□□ -0.38
NXF1-204ENST00000527064 LRRN3E7EW58 273 aa12.68□□□□□ -0.38
NXF1-204ENST00000527064 MS4A18H0YCH9 400 aa12.68□□□□□ -0.38
NXF1-204ENST00000527064 SIAH2O43255 324 aa12.68□□□□□ -0.38
NXF1-204ENST00000527064 TRAF3IP2O43734 574 aaPredicted RBP12.68□□□□□ -0.38
NXF1-204ENST00000527064 ITGA5P08648 1049 aa12.68□□□□□ -0.38
NXF1-204ENST00000527064 ADORA3P0DMS8 318 aa12.68□□□□□ -0.38
NXF1-204ENST00000527064 AHCYP23526 432 aa12.68□□□□□ -0.38
NXF1-204ENST00000527064 MS4A18Q3C1V0 323 aa12.68□□□□□ -0.38
NXF1-204ENST00000527064 ALKBH2Q6NS38 261 aa12.68□□□□□ -0.38
NXF1-204ENST00000527064 PAMR1Q6UXH9 720 aa12.68□□□□□ -0.38
NXF1-204ENST00000527064 NANOGNBQ7Z5D8 188 aa12.68□□□□□ -0.38
NXF1-204ENST00000527064 NKAIN4Q8IVV8 208 aa12.68□□□□□ -0.38
NXF1-204ENST00000527064 ARHGAP24Q8N264 748 aa12.68□□□□□ -0.38
NXF1-204ENST00000527064 PIK3C3Q8NEB9 887 aa12.68□□□□□ -0.38
NXF1-204ENST00000527064 ANKK1Q8NFD2 765 aa12.68□□□□□ -0.38
NXF1-204ENST00000527064 SGTBQ96EQ0 304 aa12.68□□□□□ -0.38
NXF1-204ENST00000527064 PLPPR2Q96GM1 343 aa12.68□□□□□ -0.38
NXF1-204ENST00000527064 ESRP2Q9H6T0 727 aaKnown RBP12.68□□□□□ -0.38
NXF1-204ENST00000527064 PLEKHF2Q9H8W4 249 aa12.68□□□□□ -0.38
NXF1-204ENST00000527064 DCAF13Q9NV06 445 aaKnown RBP12.68□□□□□ -0.38
NXF1-204ENST00000527064 CD300AQ9UGN4 299 aa12.68□□□□□ -0.38
NXF1-204ENST00000527064 ST6GALNAC2Q9UJ37 374 aa12.68□□□□□ -0.38
NXF1-204ENST00000527064 SNX13Q9Y5W8 968 aa12.68□□□□□ -0.38
NXF1-204ENST00000527064 KLF4O43474 513 aa12.67□□□□□ -0.38
NXF1-204ENST00000527064 RNF13O43567 381 aa12.67□□□□□ -0.38
NXF1-204ENST00000527064 ZNF432O94892 652 aa12.67□□□□□ -0.38
NXF1-204ENST00000527064 HPRP00739 348 aa12.67□□□□□ -0.38
NXF1-204ENST00000527064 ASAH2BP0C7U1 165 aa12.67□□□□□ -0.38
NXF1-204ENST00000527064 DNASE1P24855 282 aa12.67□□□□□ -0.38
NXF1-204ENST00000527064 UGT2B15P54855 530 aa12.67□□□□□ -0.38
NXF1-204ENST00000527064 SH3BGRP55822 239 aaPredicted RBP12.67□□□□□ -0.38
NXF1-204ENST00000527064 TRAM2Q15035 370 aa12.67□□□□□ -0.38
NXF1-204ENST00000527064 GABRA6Q16445 453 aa12.67□□□□□ -0.38
NXF1-204ENST00000527064 HMBOX1Q6NT76 420 aa12.67□□□□□ -0.38
NXF1-204ENST00000527064 KLHL24Q6TFL4 600 aa12.67□□□□□ -0.38
NXF1-204ENST00000527064 GPR137CQ8N3F9 429 aa12.67□□□□□ -0.38
NXF1-204ENST00000527064 FAM156AQ8NDB6 213 aa12.67□□□□□ -0.38
NXF1-204ENST00000527064 RBM15BQ8NDT2 890 aaKnown RBP12.67□□□□□ -0.38
NXF1-204ENST00000527064 PFN4Q8NHR9 129 aa12.67□□□□□ -0.38
NXF1-204ENST00000527064 NSMCE2Q96MF7 247 aa12.67□□□□□ -0.38
NXF1-204ENST00000527064 MUS81Q96NY9 551 aa12.67□□□□□ -0.38
NXF1-204ENST00000527064 ALKBH3Q96Q83 286 aaPredicted RBP12.67□□□□□ -0.38
NXF1-204ENST00000527064 OR2M2Q96R28 347 aa12.67□□□□□ -0.38
NXF1-204ENST00000527064 ANKRD19PQ9H560 264 aa12.67□□□□□ -0.38
NXF1-204ENST00000527064 B3GAT2Q9NPZ5 323 aa12.67□□□□□ -0.38
NXF1-204ENST00000527064 MEPEQ9NQ76 525 aaPredicted RBP12.67□□□□□ -0.38
NXF1-204ENST00000527064 AMDHD2Q9Y303 409 aa12.67□□□□□ -0.38
NXF1-204ENST00000527064 FAM32AQ9Y421 112 aaKnown RBP12.67□□□□□ -0.38
NXF1-204ENST00000527064 MAGED1Q9Y5V3 778 aaPredicted RBP12.67□□□□□ -0.38
NXF1-204ENST00000527064 ENPP4Q9Y6X5 453 aa12.67□□□□□ -0.38
NXF1-204ENST00000527064 ZNF726A6NNF4 738 aa12.66□□□□□ -0.38
NXF1-204ENST00000527064 C11orf98E9PRG8 122 aa12.66□□□□□ -0.38
NXF1-204ENST00000527064 ARPC2O15144 300 aa12.66□□□□□ -0.38
NXF1-204ENST00000527064 OR7A10O76100 309 aa12.66□□□□□ -0.38
NXF1-204ENST00000527064 RAF1P04049 648 aa12.66□□□□□ -0.38
NXF1-204ENST00000527064 ITGA2P17301 1181 aa12.66□□□□□ -0.38
NXF1-204ENST00000527064 LOXP28300 417 aaPredicted RBP12.66□□□□□ -0.38
NXF1-204ENST00000527064 YAP1P46937 504 aaKnown RBP12.66□□□□□ -0.38
NXF1-204ENST00000527064 ZP4Q12836 540 aa12.66□□□□□ -0.38
NXF1-204ENST00000527064 KEAP1Q14145 624 aa12.66□□□□□ -0.38
NXF1-204ENST00000527064 C9orf135Q5VTT2 229 aa12.66□□□□□ -0.38
NXF1-204ENST00000527064 KLHL17Q6TDP4 642 aa12.66□□□□□ -0.38
NXF1-204ENST00000527064 TRPM8Q7Z2W7 1104 aa12.66□□□□□ -0.38
NXF1-204ENST00000527064 SLC46A3Q7Z3Q1 461 aa12.66□□□□□ -0.38
NXF1-204ENST00000527064 NRGNQ92686 78 aa12.66□□□□□ -0.38
NXF1-204ENST00000527064 ADAD1Q96M93 576 aaKnown RBP12.66□□□□□ -0.38
NXF1-204ENST00000527064 MUC13Q9H3R2 512 aa12.66□□□□□ -0.38
NXF1-204ENST00000527064 PDZD2O15018 2839 aa12.65□□□□□ -0.38
NXF1-204ENST00000527064 FREM1Q5H8C1 2179 aa12.65□□□□□ -0.38
NXF1-204ENST00000527064 RPL36A-HNRNPH2H7BZ11 118 aa12.65□□□□□ -0.38
NXF1-204ENST00000527064 J3KTA2 159 aa12.65□□□□□ -0.38
NXF1-204ENST00000527064 UPK3AO75631 287 aa12.65□□□□□ -0.38
NXF1-204ENST00000527064 SERPINI2O75830 405 aa12.65□□□□□ -0.38
NXF1-204ENST00000527064 WNT11O96014 354 aa12.65□□□□□ -0.38
NXF1-204ENST00000527064 CD3EP07766 207 aa12.65□□□□□ -0.38
NXF1-204ENST00000527064 HLA-DOBP13765 273 aa12.65□□□□□ -0.38
NXF1-204ENST00000527064 RHCEP18577 417 aa12.65□□□□□ -0.38
NXF1-204ENST00000527064 FUT1P19526 365 aa12.65□□□□□ -0.38
NXF1-204ENST00000527064 PAX7P23759 505 aa12.65□□□□□ -0.38
NXF1-204ENST00000527064 ROR2Q01974 943 aaKnown RBP12.65□□□□□ -0.38
NXF1-204ENST00000527064 FOXD4Q12950 439 aaPredicted RBP12.65□□□□□ -0.38
NXF1-204ENST00000527064 MTX3Q5HYI7 312 aa12.65□□□□□ -0.38
NXF1-204ENST00000527064 NCMAPQ5T1S8 102 aa12.65□□□□□ -0.38
NXF1-204ENST00000527064 ZNF704Q6ZNC4 412 aaPredicted RBP12.65□□□□□ -0.38
NXF1-204ENST00000527064 C20orf204Q6ZNR8 217 aa12.65□□□□□ -0.38
NXF1-204ENST00000527064 HDDC2Q7Z4H3 204 aa12.65□□□□□ -0.38
NXF1-204ENST00000527064 RNF113BQ8IZP6 322 aaKnown RBP12.65□□□□□ -0.38
NXF1-204ENST00000527064 TMEM123Q8N131 208 aa12.65□□□□□ -0.38
NXF1-204ENST00000527064 LRRC17Q8N6Y2 441 aa12.65□□□□□ -0.38
NXF1-204ENST00000527064 OR52N5Q8NH56 324 aa12.65□□□□□ -0.38
NXF1-204ENST00000527064 LIPHQ8WWY8 451 aa12.65□□□□□ -0.38
NXF1-204ENST00000527064 ACOT11Q8WXI4 607 aaPredicted RBP12.65□□□□□ -0.38
NXF1-204ENST00000527064 MCUR1Q96AQ8 359 aa12.65□□□□□ -0.38
NXF1-204ENST00000527064 BPIFA2Q96DR5 249 aa12.65□□□□□ -0.38
NXF1-204ENST00000527064 BOD1Q96IK1 185 aa12.65□□□□□ -0.38
NXF1-204ENST00000527064 LRR1Q96L50 414 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms